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Expand Network Import format #64

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dotasek opened this issue Mar 15, 2018 · 2 comments
Open
15 tasks

Expand Network Import format #64

dotasek opened this issue Mar 15, 2018 · 2 comments
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@dotasek
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dotasek commented Mar 15, 2018

POST /v1/networks does not support the following formats:

  • BioPAX

  • XGMML

  • CSV/TSV/TXT

  • Excel

  • GML

  • GPML

  • GEXF

  • GraphML

  • NNF

  • OBO

  • PSI-MI 1

  • PSI-MI 2.5

  • SBML

  • SIF

  • Empty - should generate an empty network

Note that some of these (I'm looking at TSV/CSV) require unique parameters to function, which the current v1 endpoint does not support.

@dotasek
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dotasek commented Mar 15, 2018

This is related to #66 in that we're trying to do a lot of work with a file, stream, or url, AND support the existing JSON formats from the RESTful endpoints.

Getting this to make sense might be a struggle.

@dotasek
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dotasek commented Mar 26, 2018

This, along with #66, could be taken care of by using some of the code used in the drag and drop functionality.

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