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Clean up SGE docker setup
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lesteve committed Aug 29, 2018
1 parent ce808b2 commit a971742
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Showing 2 changed files with 2 additions and 11 deletions.
7 changes: 1 addition & 6 deletions ci/sge/Dockerfile-master
Original file line number Diff line number Diff line change
Expand Up @@ -9,11 +9,7 @@ RUN curl -o miniconda.sh https://repo.continuum.io/miniconda/Miniconda3-latest-L
/opt/anaconda/bin/conda clean -tipy && \
rm -f miniconda.sh
ENV PATH /opt/anaconda/bin:$PATH
RUN conda install -n root conda=4.4.11 && conda clean -tipy
RUN conda install -c conda-forge dask distributed blas pytest mock ipython pip psutil && conda clean -tipy
RUN pip install --no-cache-dir drmaa
RUN pip install --no-cache-dir git+https://github.com/dask/dask.git --upgrade --no-deps
RUN pip install --no-cache-dir git+https://github.com/dask/distributed.git --upgrade --no-deps
RUN conda install -c conda-forge dask distributed pytest && conda clean -tipy

COPY ./*.sh /
COPY ./*.txt /
Expand All @@ -25,6 +21,5 @@ EXPOSE 6444
EXPOSE 6445
EXPOSE 6446

ENV DRMAA_LIBRARY_PATH /usr/lib/gridengine-drmaa/lib/libdrmaa.so
ENV SGE_ROOT /var/lib/gridengine/
ENV SGE_CELL default
6 changes: 1 addition & 5 deletions ci/sge/Dockerfile-slave
Original file line number Diff line number Diff line change
Expand Up @@ -9,11 +9,7 @@ RUN curl -o miniconda.sh https://repo.continuum.io/miniconda/Miniconda3-latest-L
/opt/anaconda/bin/conda clean -tipy && \
rm -f miniconda.sh
ENV PATH /opt/anaconda/bin:$PATH
RUN conda install -n root conda=4.4.11 && conda clean -tipy
RUN conda install -c conda-forge dask distributed blas pytest mock ipython pip psutil && conda clean -tipy
RUN pip install --no-cache-dir drmaa
RUN pip install --no-cache-dir git+https://github.com/dask/dask.git --upgrade --no-deps
RUN pip install --no-cache-dir git+https://github.com/dask/distributed.git --upgrade --no-deps
RUN conda install -c conda-forge dask distributed pytest && conda clean -tipy

COPY ./setup-slave.sh /
COPY ./*.sh /
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