fixed wrong variable name

deeptools · Oct 4, 2017 · bed6b4b · bed6b4b
1 parent a7861f8
commit bed6b4b
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/hicexplorer/readBed.py b/hicexplorer/readBed.py
@@ -130,17 +130,17 @@ def get_bed_interval(self, bed_line):
         """
 
         line_data = bed_line.strip().split("\t")
-        if self.file_handle == 'bed12':
+        if self.file_type == 'bed12':
             assert len(line_data) == 12, "File type detected is bed12 but line {}: {} does " \
                                          "not have 12 fields.".format(self.line_number, bed_line)
 
-        elif self.file_handle == 'bed3':
+        elif self.file_type == 'bed3':
             assert len(line_data) == 3, "File type detected is bed3 but line {}: {} does " \
                 "not have 3 fields.".format(self.line_number, bed_line)
 
-        elif self.file_handle == 'bed6':
+        elif self.file_type == 'bed6':
             assert len(line_data) == 6, "File type detected is bed6 but line {}: {} does " \
-                "not have 3 fields.".format(self.line_number, bed_line)
+                "not have 6 fields.".format(self.line_number, bed_line)
         line_values = []
         for idx, r in enumerate(line_data):
             # first field is always chromosome/contig name