Computes various SV statistics
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R added RCL check Apr 12, 2016
src added GQ sum Aug 2, 2017
.gitignore ignore bin May 23, 2018
.gitmodules removed boost Jun 9, 2015
Makefile fixed bug May 23, 2018 added svprops to dellytools Nov 10, 2016

SV Properties

Computes various SV statistics from an input Delly VCF file.


git clone --recursive

cd svprops/

make all


./src/svprops [sv.vcf|sv.bcf|sv.vcf.gz] >

./src/sampleprops [sv.vcf|sv.bcf|sv.vcf.gz] >


Rscript R/svprops.R

Rscript R/svprops.R