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Popular repositories

  1. ms-interactive-viz ms-interactive-viz Public

    Customizable and informative mass spectra with Bokeh

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  2. isobaric-prot-wf-r isobaric-prot-wf-r Public

    Simple workflows for the isobaric-labeling proteomic data from Proteome Discoverer with ANOVA, t-testing, DEqMS/limma and annotation via fgsea

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  3. prot-rna-umap-clustering prot-rna-umap-clustering Public

    Joint UMAP embedding and clustering of proteomic and transcriptomic data

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  4. isobaric-inspection-jupyter isobaric-inspection-jupyter Public

    Inspecting the quality of isobaric labeling proteomic data in a Jupyter notebook. Data output from Proteome Discoverer.

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  5. isobaric-correlations isobaric-correlations Public

    Exploring correlations in an isobaric labeling mass spectrometry-based proteomic data set

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  6. julia-vs-python-ms-scripting julia-vs-python-ms-scripting Public

    Performance of Julia and Python for reading and matching mass spectrometry data

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