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Dev - parallelize influence_of_iknots #57

Merged
merged 31 commits into from
Jan 11, 2024
Merged

Dev - parallelize influence_of_iknots #57

merged 31 commits into from
Jan 11, 2024

Commits on Jan 3, 2024

  1. add a plot.cpr_summary_cpr_cpr method

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Commits on Jan 5, 2024

  1. add parrallel processing to influence_of_iknots; dev version to 0.3.0… 

    ….9002

Prior to this change influence_of_iknot used lapply and mapply and was
fine until the number of knots to assess was several hundred.  the
needed for parallel processing was made all most necessary

This change will use pbapply or parallel to allow for parallel
processing and progress bars

re #17
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  2. add pbapply to Imports, re #17, #57

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  3. bug fix re #57

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    dewittpe committed Jan 5, 2024
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Commits on Jan 6, 2024

  1. many, many, updates and bug fixes

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    dewittpe committed Jan 6, 2024
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  2. set cl <- 1 on windows since windows does not support forking re #57

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    dewittpe committed Jan 6, 2024
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  3. add test for verbose and forking in influence_of_iknots, re #57

    @dewittpe
    dewittpe committed Jan 6, 2024
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Commits on Jan 8, 2024

  1. update cpr vignette to correct typo

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    dewittpe committed Jan 8, 2024
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Commits on Jan 9, 2024

  1. move test statistic calculation to its own function in cpr.cpp

    @dewittpe
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  2. wip - moving pvalue calculations to different locations

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  3. use the local support properties of bsplines in chisq calculations

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    dewittpe committed Jan 9, 2024
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  4. wip

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  5. removing parallelization due to overhead expense, re #17

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  6. wip

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  7. wip - bug killing

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  8. dev version bump to 0.3.0.9005

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  9. add a file for exploring local support

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Commits on Jan 11, 2024

  1. update .Rbuildignore to ignore directories created by pkgdown

    @dewittpe
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  2. improve test-recover-known-spline.R

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    dewittpe committed Jan 11, 2024
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  3. remove unused placeholder in the cp construction

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    dewittpe committed Jan 11, 2024
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  4. coef_vcov will return a NULL vcov_theta when the fit is nearly perfect

    @dewittpe
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  5. update tests for change in 18e119b

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  6. update format of examples

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    dewittpe committed Jan 11, 2024
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  7. fix typo

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    dewittpe committed Jan 11, 2024
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  8. fix bug in summary of influence of iknots for cpr objects

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  9. extent testing of influence of iknots

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  10. move extract_cpr_bsplines to cpr-defunct.R

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  11. simplify the cpr example to keep computation time down

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  12. add \dontrun{} round the rgl example in plot.cpr_cn

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  13. slight simlification of example for plot.cpr_cnr

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  14. slightly simplify example for cn trying to reduce computation time

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