David H. O'Connor Lab at University of Wisconsin—Madison
Popular repositories Loading
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dairy-hpai-monitoring
dairy-hpai-monitoring PublicReal-Time Monitoring of HPAI Detections in One or More Dairy Products in the United States
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air-metagenomics
air-metagenomics Public archiveAnalysis Pipeline for Minor and Ramuta et al. 2023: Metagenomic sequencing detects human respiratory and enteric viruses in air samples collected from congregate settings
Nextflow 2
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SRA_wastewater_lineages
SRA_wastewater_lineages PublicForked from DABAKER165/SRA_wastewater_lineages
Python 1
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Shortreed-et-al-Supplemental-Code
Shortreed-et-al-Supplemental-Code PublicSupplemental Information for Characterization of 100 extended major histocompatibility complex haplotypes in Indonesian cynomolgus macaques
Python 1
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Repositories
- iWES-genotyper Public
dholab/iWES-genotyper’s past year of commit activity - dairy-hpai-monitoring Public
Real-Time Monitoring of HPAI Detections in One or More Dairy Products in the United States
dholab/dairy-hpai-monitoring’s past year of commit activity - IPD-ref-generator Public Forked from nrminor/IPD-ref-generator
Workflow for generating useful immunological gene allele databases
dholab/IPD-ref-generator’s past year of commit activity - embl-my-gbk Public Forked from nrminor/embl-my-gbk
Convert a Genbank file with many extraneous Geneious annotations to EMBL format (even with of strict requirements as IPD)
dholab/embl-my-gbk’s past year of commit activity - IPD-converter Public archive
Nextflow pipeline for converting annotated, genbank-formatted novel allele sequences to Immuno Polymorphism Database format
dholab/IPD-converter’s past year of commit activity - air-metagenomics Public archive
Analysis Pipeline for Minor and Ramuta et al. 2023: Metagenomic sequencing detects human respiratory and enteric viruses in air samples collected from congregate settings
dholab/air-metagenomics’s past year of commit activity - big-mhc-discovery Public
High-throughput, reproducible pipelines for discovering and annotating novel MHC alleles in WGS data from many species
dholab/big-mhc-discovery’s past year of commit activity
