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All the columns in the KEGG Orthology dataframe beside ORF_ID and ENTRY seem redundant. Not parsing them should be a default action. Stripping down the final interactions dataframe reduces the time of each permutation (during the brute-force permutation test) twice.
The text was updated successfully, but these errors were encountered:
846797a
Proposed change
All the columns in the KEGG Orthology dataframe beside ORF_ID and ENTRY seem redundant. Not parsing them should be a default action. Stripping down the final interactions dataframe reduces the time of each permutation (during the brute-force permutation test) twice.
The text was updated successfully, but these errors were encountered: