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1. suite2p_analysis_py suite2p_analysis_py Public

   Forked from dafishcode/suite2p_analysis_py

   Working with suite2p segmented functional images

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2. img_process img_process Public

   Forked from dafishcode/img_process

   Scripts for pre-processing image data in python

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3. criticality criticality Public

   Forked from dafishcode/criticality

   Repo contains code for algorithms which calculate the spatiotemporal propagation of activity (avalanches) and measures critical statistics.

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4. avalanche_model avalanche_model Public

   Forked from dafishcode/avalanche_model

   Repo for building spiking networks for modelling avalanche dynamics.

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5. mutant_analysis mutant_analysis Public

   Forked from dafishcode/zebrafish_mutant_analysis

   Repo for identifying biomarkers of altered brain dynamics in zebrafish mutant models.

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6. empirical_dynamic_modelling empirical_dynamic_modelling Public

   Forked from dafishcode/empirical_dynamic_modelling

   Repo for running empirical dynamic modelling techniques on data - using lagged coordinate embedding to perform simplex projection and convergent cross mapping (CCM) - techniques which can account f…

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