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Bonsai: Ultrafast, flexible taxonomic analysis and classification
FRP: Fast Randomized Projections
C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings
Barcoded Molecular Families
Type-generic SIMD library for optimized generic code generation
Fast, memory-efficient, scalable genomic set operations using HyperLoglogs
1,420 contributions in the last year
Threads only need to lock when inserting into the dictionary. (Small but simple change, but it might make things easier until it's replaced.)
in private repositories
Dec 1 – Dec 16
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