Example scripts to process and analyze data for the X-SCID scRNA-seq article.
Key software and algorithms： 10x Genomics Cell Ranger 3.1.0 version R 3.6.0
R package： Seurat (v3), SingleR, scater, Matrix, clusterProfiler, AUCell, NMF, GSEABase, cowplot, patchwork, ggplot2, dplyr, RColorBrewer, pheatmap, et al.