Fix FlexDLL bootstrap when system flexlink found (ocaml#779)

Building the native runtime could accidentally pick up the wrong include
directory for flexdll.h.

Background in https://sympa.inria.fr/sympa/arc/caml-list/2016-06/msg00123.html

Makefile.nt

@@ -604,7 +604,7 @@ alldepend::
 runtimeopt: makeruntimeopt stdlib/libasmrun.$(A)
 
 makeruntimeopt:
-	cd asmrun ; $(MAKEREC) all
+	cd asmrun ; $(MAKEREC) $(BOOT_FLEXLINK_CMD) all
 stdlib/libasmrun.$(A): asmrun/libasmrun.$(A)
 	cp asmrun/libasmrun.$(A) stdlib/libasmrun.$(A)
 clean::