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broadinstitute/gatk
broadinstitute/gatk PublicOfficial code repository for GATK versions 4 and up
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samtools/htsjdk
samtools/htsjdk PublicA Java API for high-throughput sequencing data (HTS) formats.
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broadinstitute/picard
broadinstitute/picard PublicA set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
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googleapis/google-cloud-java
googleapis/google-cloud-java PublicGoogle Cloud Client Library for Java
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