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Coveralls cleanup #83

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merged 3 commits into from
Aug 14, 2020
Merged

Coveralls cleanup #83

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0420730
Switch to using coveralls (not python-coveralls)
dwhswenson Aug 13, 2020
bca93b2
exclude python==2 / pandas<1.1 lines from coverage
dwhswenson Aug 13, 2020
22944a7
exclude another line from coverage
dwhswenson Aug 13, 2020
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2 changes: 1 addition & 1 deletion ci/pip-install/testing_requirements.txt
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
pytest
pytest-cov
python-coveralls
coveralls
codacy-coverage
autorelease
4 changes: 2 additions & 2 deletions contact_map/contact_count.py
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Expand Up @@ -31,7 +31,7 @@ def _colorbar(with_colorbar, cmap_f, norm, min_val, ax=None):
# TODO: remove following: this is a monkeypatch for a bug in pandas
# see: https://github.com/pandas-dev/pandas/issues/29814
from pandas._libs.sparse import BlockIndex, IntIndex, SparseIndex
def _patch_from_spmatrix(cls, data):
def _patch_from_spmatrix(cls, data): # -no-cov-
length, ncol = data.shape

if ncol != 1:
Expand Down Expand Up @@ -130,7 +130,7 @@ def df(self):
index = list(range(self.n_x))
columns = list(range(self.n_y))

if _PD_VERSION < (0, 25): # py27 only
if _PD_VERSION < (0, 25): # py27 only -no-cov-
mtx = mtx.tocoo()
return pd.SparseDataFrame(mtx, index=index, columns=columns)

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2 changes: 1 addition & 1 deletion contact_map/py_2_3.py
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Expand Up @@ -2,7 +2,7 @@

try:
getargspec = inspect.getfullargspec
except AttributeError:
except AttributeError: # -no-cov-
getargspec = inspect.getargspec

def inspect_method_arguments(method, no_self=True):
Expand Down