Implementation of LET modifying objectives #706
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Dirty dose is calculated test wise in matRad_returnDirtyandCleanDose To implement dirty dose in matRad there are matRad_calcLETmask and matRad_calcDirtyDose otherwise there are new dirty dose objectives in an extra DirtyDoseObjectives folder
Changes in dirty dose objectives and two more Objectives: mLETDose and LETd
…to dev_varRBErobOpt
changes in LETd Objectives
cluster variance for dirty dose, dose and LETd + changes in LETd Projection
removing all the unnecessary parts
amitantony
reviewed
Apr 10, 2024
| % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | ||
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| if ~exist('dij','var') || isempty(dij) | ||
| disp('Not enough input arguments! Calculation is not working.') |
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Maybe "Not enough input arguments, missing or incomplete dij struct"
amitantony
reviewed
Apr 10, 2024
| disp('Not enough input arguments! Calculation is not working.') | ||
| else | ||
| if ~exist('LET_thres','var') || isempty(LET_thres) | ||
| disp('Not enough input arguments! Calculation is not working.') |
amitantony
reviewed
Apr 10, 2024
| @@ -0,0 +1,72 @@ | |||
| function [stackedbarDose,physDoseInDepth,RBExDcurve,RBEcurve,h,d] = matRad_plotDirtynCleanDoseShare(definedEnd,index,ct,ctCube,dij,resultGUI,add,LET_thres,k,displayComparison) | |||
| % | |||
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small description on the kind of plot generated here
amitantony
reviewed
Apr 10, 2024
| @@ -0,0 +1,53 @@ | |||
| function [wPhysDose,LET] = matRad_plotLETbeamletSpectrumInVoxel(index, ct, ctCube, dij, resultGUI, bins, displayfigures) | |||
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could we remove the ctCube in the arguments and just directly use the ct ?
amitantony
reviewed
Apr 10, 2024
| @@ -0,0 +1,83 @@ | |||
| function [highLETphysDose,lowLETphysDose,totalphysDose] = matRad_returnDirtyandCleanDose(index,ct,ctCube,dij,resultGUI,LET_thres,displayfigures,maxDirtyDose,bins) | |||
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same here with the ctCube?
amitantony
reviewed
Apr 22, 2024
matRad_calcLETmask.m
Outdated
| % dij: matRad dij struct | ||
| % | ||
| % output | ||
| % LETmask: logical matrix for dirty dose |
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have to change the documentation for the output variables
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What's new:
For all new Objectives there are changes in objectiveFunction, objectiveGradient, OptimizationProblem and so on.