Contribute muscle

easybuild/easyblocks/m/muscle.py

@@ -0,0 +1,45 @@
+## 
+# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild
+#
+# Copyright:: Copyright 2012-2013 The Cyprus Institute
+# Authors::   Andreas Panteli <a.panteli@cyi.ac.cy>, George Tsouloupas <g.tsouloupas@cyi.ac.cy>
+# License::   MIT/GPL
+# $Id$
+#
+##
+"""
+EasyBuild support for building and installing MUSCLE, implemented as an easyblock
+
+@author: Andreas Panteli (CyI), George Tsouloupas (CyI)
+"""
+
+import os
+
+from easybuild.framework.easyblock import EasyBlock
+from easybuild.easyblocks.generic.packedbinary import PackedBinary
+from easybuild.tools.filetools import mkdir, extract_file
+
+class EB_MUSCLE(PackedBinary):
+	"""
+	Support for building MUSCLE
+
+	"""
+	def extract_step(self):
+		"""
+		Unpack the source files.
+		"""
+
+		newdir = '%s-%s' % (self.name.lower(), self.version)
+		self.cfg['start_dir'] = os.path.join(self.builddir, newdir)
+		try:
+			mkdir(self.cfg['start_dir'])
+			self.log.debug("Created new directory %s" % (self.cfg['start_dir']))
+		except OSError, err:
+                        self.log.exception("Can't create new directory %s: %s" % (self.cfg['start_dir'], err))
+		for tmp in self.src:
+			self.log.info("Unpacking source %s" % tmp['name'])
+			srcdir = extract_file(tmp['path'], self.cfg['start_dir'], cmd=tmp['cmd'], extra_options=self.cfg['unpack_options'])
+			if srcdir:
+				self.src[self.src.index(tmp)]['finalpath'] = srcdir
+			else:
+				self.log.error("Unpacking source %s failed" % tmp['name'])