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Merge pull request #18100 from eylenth/20230615121212_new_pr_Bowtie131
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{bio}[GCC/12.2.0] Bowtie v1.3.1
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boegel committed Jul 4, 2024
2 parents 59dd4a5 + eb8ac95 commit dc20a5b
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30 changes: 30 additions & 0 deletions easybuild/easyconfigs/b/Bowtie/Bowtie-1.3.1-GCC-12.2.0.eb
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##
# This is a contribution from DeepThought HPC Service, Flinders University, Adelaide, Australia
# Homepage: https://staff.flinders.edu.au/research/deep-thought
#
# Authors:: Robert Qiao <rob.qiao@flinders.edu.au>
# License:: Artistic v2.0
#
# Notes::
##

name = 'Bowtie'
version = '1.3.1'

homepage = 'http://bowtie-bio.sourceforge.net/index.shtml'
description = """Bowtie is an ultrafast, memory-efficient short read aligner.
It aligns short DNA sequences (reads) to the human genome."""

toolchain = {'name': 'GCC', 'version': '12.2.0'}
toolchainopts = {'pic': True, 'cstd': 'gnu++98'}

source_urls = ['https://sourceforge.net/projects/bowtie-bio/files/bowtie/%(version)s/']
sources = ['%(namelower)s-%(version)s-src.zip']
checksums = ['e23517aa53846ef828172be911750cd05748522117efcbbe5a36f3241fb40761']

dependencies = [
('tbb', '2021.9.0'),
('zlib', '1.2.12'),
]

moduleclass = 'bio'

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