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wishlist for 2020a merge sprint #10000

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boegel opened this issue Mar 6, 2020 · 14 comments
Closed

wishlist for 2020a merge sprint #10000

boegel opened this issue Mar 6, 2020 · 14 comments
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2020a before 2020a is released
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2020a
Milestone
4.x

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@boegel
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boegel commented Mar 6, 2020 •
edited by ocaisa

(keep this list alphabetical please)

High priority

Lower priority
@boegel boegel added the 2020a before 2020a is released label Mar 6, 2020
@boegel boegel added this to the 2020a milestone Mar 6, 2020
@boegel boegel added this to To do in 2020a via automation Mar 6, 2020
@branfosj
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branfosj commented Mar 18, 2020 •
edited by akesandgren

I am working on:

@akesandgren
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We should probably use Pillow-SIMD instead of Pillow where ever possible...

@branfosj
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We should probably use Pillow-SIMD instead of Pillow where ever possible...

Yes, so long as we can remove the -msse4 in the compile args in places where that'll not work.

@akesandgren
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akesandgren commented Mar 18, 2020 •
edited

Should be a fairly simple patch to do that i guess..
I'll take a look....

Bah, it has either SSE4 or AVX2 support, rather useless in the general case for us.

@branfosj
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I've added Python 2.7.17 in #10145

@bioteamMichael
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I'm planning to start working on R, though I'm still waiting on the toolchains to build (and with everyone home things are definitely a bit more chaotic......)

@akesandgren
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@bioteamMichael @lexming is also working on that, please sync

@branfosj
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ImageMagick (7.0.10-1), including LittleCMS (2.9) and GhostScript (9.52) in #10171

@bioteamMichael
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Working on dependencies for BLAST+ 2.10.0.

@bioteamMichael
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HTSLib in 10206

@bioteamMichael
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VCFtools is in 10207. The last versioned release was 0.1.16, released in 2018. I went with that as the version, but it looks like updates were being checked into "master" on github as of about 10 days ago, so not sure if you want to consider the master branch the latest release, or stay with 0.1.16.

@akesandgren
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If there are proper releases we always use them. So 0.1.16 is the correct version to use.

@branfosj
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branfosj commented Mar 22, 2020 •
edited

I am working towards Qt5 5.14.1 - various deps:

@branfosj
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@Micket Micket modified the milestones: 2020a, 4.x May 26, 2020
@boegel boegel closed this as completed Oct 28, 2020
2020a automation moved this from To do to Done Oct 28, 2020
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@branfosj @Micket @akesandgren @boegel @bioteamMichael