{data}[iimpi/2022a] netCDF-Fortran v4.6.0, netCDF v4.9.0 #16009

SimonPinches · 2022-08-09T12:39:58Z

(created using eb --new-pr)

easybuild/easyconfigs/n/netCDF/netCDF-4.9.0-iimpi-2022a.eb

SebastianAchilles · 2022-08-09T13:24:48Z

@boegelbot please test @ jsc-zen2

boegelbot · 2022-08-09T13:27:07Z

@SebastianAchilles: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=16009 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_16009 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

exit code: 0
output:

Submitted batch job 1435

Test results coming soon (I hope)...

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boegelbot · 2022-08-09T13:58:33Z

Test report by @boegelbot
FAILED
Build succeeded for 0 out of 2 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/150163795b0f2a6802655df10d2e0838 for a full test report.

SebastianAchilles · 2022-08-09T17:39:15Z

@boegelbot please test @ generoso

boegelbot · 2022-08-09T17:40:09Z

@SebastianAchilles: Request for testing this PR well received on login1

PR test command 'EB_PR=16009 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_16009 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 8974

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
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boegelbot · 2022-08-09T18:13:03Z

Test report by @boegelbot
FAILED
Build succeeded for 0 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/c1faf4988b8a2c8606feb6170eb51871 for a full test report.

SebastianAchilles · 2022-08-09T18:19:36Z

Test report by @SebastianAchilles
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
zen2-ubuntu-eb - Linux Ubuntu 22.04, x86_64, AMD EPYC 7452 32-Core Processor (zen2), Python 3.10.4
See https://gist.github.com/36aa99ff1e3f59dff967d9174d16b501 for a full test report.

SebastianAchilles · 2022-08-09T18:19:48Z

Test report by @SebastianAchilles
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
bdw-opensuse-154 - Linux openSUSE Leap 15.4, x86_64, Intel(R) Core(TM) i7-6900K CPU @ 3.20GHz (broadwell), 2 x NVIDIA NVIDIA GeForce GTX 1060 6GB, 510.85.02, Python 3.6.15
See https://gist.github.com/d496983741572cd3e9a51d535b4d8a9c for a full test report.

Micket · 2022-08-11T17:47:04Z

Test report by @boegelbot FAILED Build succeeded for 0 out of 2 (2 easyconfigs in total) cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8 See https://gist.github.com/c1faf4988b8a2c8606feb6170eb51871 for a full test report.

@branfosj noted that this failure is likely the same issue as #15959
If so, then it's almost certainly the NASA benchmark test that times out. It's a test that does parallell IO, so, perhaps it's related to filesystem? Could be horrendously slow on some systems? It takes 168s on my machine, so as far as i could tell, it would need to be running waaay slower to hit the time limit in ctest.
Does generoso bot build on /dev/shm? I never got access there

Micket · 2022-08-17T10:32:02Z

See patch in #16050

Micket

please add the netCDF-%(version)s_skip-nasa-test.patch patch that was just merged.

Micket · 2022-08-18T17:03:06Z

uhm, i don't think you should have merged the commit (since that commit is already merged into develop). This needs to be rebased on develop anyway now

SimonPinches · 2022-08-18T17:10:35Z

@Micket, yeah, I think I got a bit carried away there. I'll reset to before the merge and then rebase onto develop.

…-iimpi-2022a.eb

Micket

lgtm

Micket · 2022-08-19T15:52:36Z

@boegelbot please test @ generoso

boegelbot · 2022-08-19T15:55:12Z

@Micket: Request for testing this PR well received on login1

PR test command 'EB_PR=16009 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_16009 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 9030

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

Micket · 2022-08-19T16:00:07Z

Test report by @Micket
FAILED
Build succeeded for 0 out of 2 (2 easyconfigs in total)
alvis-c1 - Linux Rocky Linux 8.5, x86_64, Intel Xeon Processor (Skylake), Python 3.6.8
See https://gist.github.com/d0db527260df8e0c286abc64d0dc5475 for a full test report.

Micket · 2022-08-19T16:10:26Z

ugh

206/227 Test #206: dap4_test_test_thredds ................***Failed  129.72 sec
unknown argument test_thredds.sh
test_thredds.sh:
testing: dap4://thredds-test.unidata.ucar.edu/thredds/dap4/casestudies/harvey/goes16/CONUS/Channel01/20170821/GOES16_CONUS_20170821_020218_0.47_1km_33.3N_91.4W.nc4?dap4.ce=y#checksummode=ignore
Error:curl error: Timeout was reached
/dev/shm/netCDF/4.9.0/iimpi-2022a/easybuild_obj/ncdump/ncdump: dap4://thredds-test.unidata.ucar.edu/thredds/dap4/casestudies/harvey/goes16/CONUS/Channel01/20170821/GOES16_CONUS_20170821_020218_0.47_1km_33.3N_91.4W.nc4?dap4.ce=y#checksummode=ignore: NetCDF: libcurl failure
*** Fail: dap4://thredds-test.unidata.ucar.edu/thredds/dap4/casestudies/harvey/goes16/CONUS/Channel01/20170821/GOES16_CONUS_20170821_020218_0.47_1km_33.3N_91.4W.nc4?dap4.ce=y#checksummode=ignore

tests are trying to fetch things online, and it seems this was down now when i tried to build it.

We can consider skipping these tests, if it's just dap4_ stuff that's affected here

runtest = 'test ARGS="-E dap4"'

(of course, do the same for the gompi version)

boegelbot · 2022-08-19T16:13:24Z

Test report by @boegelbot
FAILED
Build succeeded for 0 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/6e763ca5be2758bca9f9fe4c2f36453c for a full test report.

Micket · 2022-08-29T11:41:54Z

Bah, sorry about that, i stumbled over the keyboard and accidentally closed

easybuild/easyconfigs/n/netCDF/netCDF-4.9.0-iimpi-2022a.eb

Disable DAP remote tests Co-authored-by: Mikael Öhman <micketeer@gmail.com>

Micket · 2022-08-30T13:55:16Z

Sorry i was unclear, you don't need the -E dap4 thing thanks to the cmake configuration line that disables the exact tests instead.

I'm just holding off merging this because a big issue was discovered with HDF5, and we'll need to downgrade to 1.12.2
See #16153

SimonPinches · 2022-08-30T13:58:36Z

@Micket, Ah, okay. I'll remove this last commit then.

easybuild/easyconfigs/n/netCDF/netCDF-4.9.0-iimpi-2022a.eb

Co-authored-by: Mikael Öhman <micketeer@gmail.com>

easybuild/easyconfigs/n/netCDF/netCDF-4.9.0-iimpi-2022a.eb

SebastianAchilles · 2022-11-18T09:23:43Z

@boegelbot please test @ generoso

boegelbot · 2022-11-18T09:25:22Z

@SebastianAchilles: Request for testing this PR well received on login1

PR test command 'EB_PR=16009 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_16009 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 9578

Test results coming soon (I hope)...

- notification for comment with ID 1319745436 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

SebastianAchilles · 2022-11-18T09:30:42Z

Test report by @SebastianAchilles
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
zen2-ubuntu-2204 - Linux Ubuntu 22.04.1 LTS (Jammy Jellyfish), x86_64, AMD EPYC 7452 32-Core Processor (zen2), Python 3.10.6
See https://gist.github.com/8063812a14458d635284618526b39ee4 for a full test report.

SebastianAchilles · 2022-11-18T09:31:20Z

Test report by @SebastianAchilles
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
bwd-rockylinux-90 - Linux Rocky Linux 9.0 (Blue Onyx), x86_64, Intel(R) Core(TM) i7-6900K CPU @ 3.20GHz (broadwell), Python 3.9.10
See https://gist.github.com/4b022287009c54c17c4fd7507b04fe6b for a full test report.

SebastianAchilles · 2022-11-18T09:31:44Z

Test report by @SebastianAchilles
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
skl-opensuse-154 - Linux openSUSE Leap 15.4, x86_64, Intel(R) Core(TM) i7-8700 CPU @ 3.20GHz (skylake), Python 3.6.15
See https://gist.github.com/77417158b43ede130c2b5874583b3c6d for a full test report.

SebastianAchilles · 2022-11-18T09:38:23Z

@boegelbot please test @ jsc-zen2

boegelbot · 2022-11-18T09:42:12Z

@SebastianAchilles: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=16009 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_16009 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

exit code: 0
output:

Submitted batch job 1794

Test results coming soon (I hope)...

- notification for comment with ID 1319760227 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2022-11-18T09:56:57Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/fa2e009287de46063190b72f715accc0 for a full test report.

boegelbot · 2022-11-18T10:34:51Z

Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/5268e453fbe25525638b16c38b1d6964 for a full test report.

easybuild/easyconfigs/n/netCDF/netCDF-4.9.0-iimpi-2022a.eb

SebastianAchilles

lgtm

…asyconfigs into 20220809143954_new_pr_netCDF-Fortran460

Requested changes were applied

SebastianAchilles · 2022-11-18T11:46:43Z

Going in, thanks @SimonPinches!

SebastianAchilles added this to the 4.x milestone Aug 9, 2022

SebastianAchilles added the update label Aug 9, 2022

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SimonPinches force-pushed the 20220809143954_new_pr_netCDF-Fortran460 branch from 431f3ee to 06990d3 Compare August 9, 2022 16:21

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SimonPinches added 2 commits August 18, 2022 19:21

adding easyconfigs: netCDF-Fortran-4.6.0-iimpi-2022a.eb, netCDF-4.9.0…

bb85368

…-iimpi-2022a.eb

Add netCDF-4.9.0_skip-nasa-test.patch to netCDF-4.9.0-iimpi-2022a.eb

1acfc6c

SimonPinches force-pushed the 20220809143954_new_pr_netCDF-Fortran460 branch from 71958e3 to 1acfc6c Compare August 18, 2022 17:23

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SimonPinches dismissed Micket’s stale review via 5611a5e August 29, 2022 18:02

Update easybuild/easyconfigs/n/netCDF/netCDF-4.9.0-iimpi-2022a.eb

5611a5e

Disable DAP remote tests Co-authored-by: Mikael Öhman <micketeer@gmail.com>

SimonPinches force-pushed the 20220809143954_new_pr_netCDF-Fortran460 branch from daa1824 to 5611a5e Compare August 30, 2022 13:59

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Co-authored-by: Mikael Öhman <micketeer@gmail.com>

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Merge branch 'develop' of https://github.com/easybuilders/easybuild-e…

70e5717

…asyconfigs into 20220809143954_new_pr_netCDF-Fortran460

SebastianAchilles merged commit 931b4b9 into easybuilders:develop Nov 18, 2022

SebastianAchilles modified the milestones: 4.x, next release (4.6.3?) Nov 18, 2022

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{data}[iimpi/2022a] netCDF-Fortran v4.6.0, netCDF v4.9.0 #16009

{data}[iimpi/2022a] netCDF-Fortran v4.6.0, netCDF v4.9.0 #16009

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{data}[iimpi/2022a] netCDF-Fortran v4.6.0, netCDF v4.9.0 #16009

{data}[iimpi/2022a] netCDF-Fortran v4.6.0, netCDF v4.9.0 #16009

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