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{bio}[foss/2018a] HiCExplorer 2.1.1 w/ Python 3.6.4 (plus some deps) #6342

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merged 3 commits into from
May 19, 2018
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{bio}[foss/2018a] HiCExplorer 2.1.1 w/ Python 3.6.4 (plus some deps) #6342

merged 3 commits into from
May 19, 2018

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ebirn
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@ebirn ebirn commented May 18, 2018

(created using eb --new-pr)

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ebirn commented May 18, 2018

will change Blosc version used in Pytables, switching to 1.14.2

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ebirn commented May 18, 2018

that build seems to fail because of a hanging python 2.6 download. Can I trigger a rebuild? /cc @boegel

@easybuilders easybuilders deleted a comment from boegelbot May 18, 2018
@easybuilders easybuilders deleted a comment from boegelbot May 18, 2018
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boegel commented May 18, 2018

@ebirn Done, I've re-triggered the faulty test... My hope is to find some time to look into a way to avoid these quirky failures, either by caching the stuff we download or by letting @boegelbot automatically re-trigger a test if it can tell that it's a quirky failure.

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boegel requested changes May 18, 2018
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easybuild/easyconfigs/h/HiCExplorer/HiCExplorer-2.1.1-foss-2018a-Python-3.6.4.eb Outdated

toolchain = {'name': 'foss', 'version': '2018a'}

sources = []
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@ebirn This can be removed?

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boegel commented May 18, 2018

Test report by @boegel
SUCCESS
Build succeeded for 4 out of 4 (4 easyconfigs in this PR)
node2435.golett.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2680 v3 @ 2.50GHz, Python 2.7.5
See https://gist.github.com/39f41a13c91cc44dea2b32fc02da14bd for a full test report.

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boegel commented May 18, 2018

Test report by @boegel
SUCCESS
Build succeeded for 4 out of 4 (4 easyconfigs in this PR)
node2065.delcatty.os - Linux centos linux 7.4.1708, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/215f01902b80acd1cb692d49cad4c5f4 for a full test report.

@boegel boegel changed the title HiCExplorer plus some deps {bio}[foss/2018a] HiCExplorer 2.1.1 w/ Python 3.6.4 (plus some deps) May 19, 2018
@boegel boegel added this to the 3.6.1 milestone May 19, 2018
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boegel commented May 19, 2018

Going in, thanks @ebirn!

@boegel boegel merged commit b66278a into easybuilders:develop May 19, 2018
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