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Merge pull request #3720 from easybuilders/4.4.x
release EasyBuild v4.4.0
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| # documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions | ||
| name: test EasyBuild bootstrap script | ||
| on: [push, pull_request] | ||
| jobs: | ||
| setup: | ||
| runs-on: ubuntu-latest | ||
| outputs: | ||
| lmod7: Lmod-7.8.22 | ||
| lmod8: Lmod-8.4.27 | ||
| modulesTcl: modules-tcl-1.147 | ||
| modules3: modules-3.2.10 | ||
| modules4: modules-4.1.4 | ||
| steps: | ||
| - run: "true" | ||
| build: | ||
| needs: setup | ||
| runs-on: ubuntu-18.04 | ||
| strategy: | ||
| matrix: | ||
| # Don't run for Python 3.8, 3.9 , people should just use `pip install easybuild` | ||
| python: [2.7, 3.6, 3.7] | ||
| modules_tool: | ||
| # use variables defined by 'setup' job above, see also | ||
| # https://docs.github.com/en/actions/reference/context-and-expression-syntax-for-github-actions#needs-context | ||
| - ${{needs.setup.outputs.lmod7}} | ||
| - ${{needs.setup.outputs.lmod8}} | ||
| module_syntax: [Lua] | ||
| lc_all: [""] | ||
| include: | ||
| # also test with module tools other than Lmod (only Tcl syntax) | ||
| - modules_tool: ${{needs.setup.outputs.modulesTcl}} | ||
| module_syntax: Tcl | ||
| python: 2.7 | ||
| - modules_tool: ${{needs.setup.outputs.modulesTcl}} | ||
| module_syntax: Tcl | ||
| python: 3.6 | ||
| - modules_tool: ${{needs.setup.outputs.modules3}} | ||
| module_syntax: Tcl | ||
| python: 2.7 | ||
| - modules_tool: ${{needs.setup.outputs.modules3}} | ||
| module_syntax: Tcl | ||
| python: 3.6 | ||
| - modules_tool: ${{needs.setup.outputs.modules4}} | ||
| module_syntax: Tcl | ||
| python: 2.7 | ||
| - modules_tool: ${{needs.setup.outputs.modules4}} | ||
| module_syntax: Tcl | ||
| python: 3.6 | ||
| # There may be encoding errors in Python 3 which are hidden when an UTF-8 encoding is set | ||
| # Hence run the tests (again) with LC_ALL=C and Python 3.6 (or any < 3.7) | ||
| - python: 3.6 | ||
| modules_tool: ${{needs.setup.outputs.lmod8}} | ||
| module_syntax: Lua | ||
| lc_all: C | ||
| fail-fast: false | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
|
|
||
| - name: set up Python | ||
| uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: ${{matrix.python}} | ||
| architecture: x64 | ||
|
|
||
| - name: install OS & Python packages | ||
| run: | | ||
| # disable apt-get update, we don't really need it, | ||
| # and it does more harm than good (it's fairly expensive, and it results in flaky test runs) | ||
| # sudo apt-get update | ||
| # for modules tool | ||
| sudo apt-get install lua5.2 liblua5.2-dev lua-filesystem lua-posix tcl tcl-dev | ||
| # fix for lua-posix packaging issue, see https://bugs.launchpad.net/ubuntu/+source/lua-posix/+bug/1752082 | ||
| # needed for Ubuntu 18.04, but not for Ubuntu 20.04, so skipping symlinking if posix.so already exists | ||
| if [ ! -e /usr/lib/x86_64-linux-gnu/lua/5.2/posix.so ] ; then | ||
| sudo ln -s /usr/lib/x86_64-linux-gnu/lua/5.2/posix_c.so /usr/lib/x86_64-linux-gnu/lua/5.2/posix.so | ||
| fi | ||
| - name: install modules tool | ||
| run: | | ||
| # avoid downloading modules tool sources into easybuild-framework dir | ||
| cd $HOME | ||
| export INSTALL_DEP=$GITHUB_WORKSPACE/easybuild/scripts/install_eb_dep.sh | ||
| # install Lmod | ||
| source $INSTALL_DEP ${{matrix.modules_tool}} $HOME | ||
| # changes in environment are not passed to other steps, so need to create files... | ||
| echo $MOD_INIT > mod_init | ||
| echo $PATH > path | ||
| if [ ! -z $MODULESHOME ]; then echo $MODULESHOME > moduleshome; fi | ||
| - name: test bootstrap script | ||
| run: | | ||
| # (re)initialize environment for modules tool | ||
| if [ -f $HOME/moduleshome ]; then export MODULESHOME=$(cat $HOME/moduleshome); fi | ||
| source $(cat $HOME/mod_init); type module | ||
| # also pick up changes to $PATH set by sourcing $HOME/mod_init | ||
| export PATH=$(cat $HOME/path) | ||
| # define $EASYBUILD_MODULES_TOOL only for oldest module tools | ||
| # (for Lmod and EnvironmentModules 4.x the bootstrap script should correctly auto-detect the modules tool) | ||
| if [[ ${{matrix.modules_tool}} =~ ^modules-tcl- ]]; then | ||
| export EASYBUILD_MODULES_TOOL=EnvironmentModulesTcl | ||
| elif [[ ${{matrix.modules_tool}} =~ ^modules-3 ]]; then | ||
| export EASYBUILD_MODULES_TOOL=EnvironmentModulesC | ||
| fi | ||
| # version and SHA256 checksum are hardcoded below to avoid forgetting to update the version in the script along with contents | ||
| EB_BOOTSTRAP_VERSION=$(grep '^EB_BOOTSTRAP_VERSION' easybuild/scripts/bootstrap_eb.py | sed 's/[^0-9.]//g') | ||
| EB_BOOTSTRAP_SHA256SUM=$(sha256sum easybuild/scripts/bootstrap_eb.py | cut -f1 -d' ') | ||
| EB_BOOTSTRAP_FOUND="$EB_BOOTSTRAP_VERSION $EB_BOOTSTRAP_SHA256SUM" | ||
| EB_BOOTSTRAP_EXPECTED="20210106.01 c2d93de0dd91123eb4f51cfc16d1f5efb80f1d238b3d6cd100994086887a1ae0" | ||
| test "$EB_BOOTSTRAP_FOUND" = "$EB_BOOTSTRAP_EXPECTED" || (echo "Version check on bootstrap script failed $EB_BOOTSTRAP_FOUND" && exit 1) | ||
| # test bootstrap script | ||
| export PREFIX=/tmp/$USER/$GITHUB_SHA/eb_bootstrap | ||
| python easybuild/scripts/bootstrap_eb.py $PREFIX | ||
| # unset $PYTHONPATH to avoid mixing two EasyBuild 'installations' when testing bootstrapped EasyBuild module | ||
| unset PYTHONPATH | ||
| # simple sanity check on bootstrapped EasyBuild module | ||
| module use $PREFIX/modules/all | ||
| module load EasyBuild | ||
| eb --version |
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