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1. ancestry_pipeline ancestry_pipeline Public

   Forked from armartin/ancestry_pipeline

   Provides helper scripts for inferring local ancestry, performing ancestry-specific PCA, etc

   Python 3 1

2. Tractor_ms_results Tractor_ms_results Public

   Results and code used to produce results in Atkinson et al. (2020)

   Jupyter Notebook 2 1

3. LAIaccuracy LAIaccuracy Public

   Calculations of accuracy comparing Williams lab simulations to RFmix runs

   Python 1

4. GERPcalcs GERPcalcs Public

   Assessing average GERP scores in sliding windows

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5. UKB_ancestry UKB_ancestry Public

   Code related to local ancestry, ADMIXTURE analyses, and ancestry-specific PCA implementation on admixed UKB individuals

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6. PHESANT PHESANT Public

   Forked from astheeggeggs/PHESANT

   PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank

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