Skip to content
@ebi-gene-expression-group

EBI Gene Expression Group

Popular repositories

  1. anatomogram anatomogram Public

    Anatomogram illustrating Expression Atlas experiments

    JavaScript 36 20

  2. scanpy-scripts scanpy-scripts Public

    Scripts for using scanpy

    Python 28 13

  3. atlas atlas Public archive

    Expression Atlas

    Java 26 5

  4. r-seurat-scripts r-seurat-scripts Public

    Scripts to install as a Bioconda package for making workflows

    R 16 5

  5. container-galaxy-sc-tertiary container-galaxy-sc-tertiary Public

    Galaxy container for single cell RNA-Seq tertiary analysis tools

    Python 16 11

  6. scxa-workflows scxa-workflows Public

    Higher level repo for aggregating all of Atlas workflow logic for Single Cell

    Shell 13 2

Repositories

Showing 10 of 178 repositories
  • atlas-web-single-cell Public

    Single Cell Expression Atlas web application

    ebi-gene-expression-group/atlas-web-single-cell’s past year of commit activity
    Java 5 Apache-2.0 5 66 5 Updated Jun 20, 2024
  • atlas-web-bulk Public

    Bulk Expression Atlas web application

    ebi-gene-expression-group/atlas-web-bulk’s past year of commit activity
    Java 0 Apache-2.0 1 30 5 Updated Jun 20, 2024
  • atlas-web-core Public

    Business logic for single cell and bulk Expression Atlas and for the up-and-coming Expression Atlas API

    ebi-gene-expression-group/atlas-web-core’s past year of commit activity
    Java 0 1 3 1 Updated Jun 19, 2024
  • scanpy-scripts Public

    Scripts for using scanpy

    ebi-gene-expression-group/scanpy-scripts’s past year of commit activity
    Python 28 Apache-2.0 13 11 3 Updated Jun 14, 2024
  • db-scxa Public

    An AtlasProd module for loading scxa-analytics data to postgres.

    ebi-gene-expression-group/db-scxa’s past year of commit activity
    Shell 2 1 4 2 Updated Jun 14, 2024
  • atlas-bash-util Public
    ebi-gene-expression-group/atlas-bash-util’s past year of commit activity
    Shell 0 0 2 1 Updated Jun 14, 2024
  • atlas-anndata Public

    Tools for anndata generation/ consumption for Expression Atlas

    ebi-gene-expression-group/atlas-anndata’s past year of commit activity
    Python 0 Apache-2.0 0 1 2 Updated Jun 14, 2024
  • atlas-components Public

    Front end components of Expression Atlas and Single Cell Expression Atlas

    ebi-gene-expression-group/atlas-components’s past year of commit activity
    HTML 3 3 9 1 Updated Jun 4, 2024
  • galaxy-gxa-tools-setup Public

    Standard tool installation for GXA Galaxy instances

    ebi-gene-expression-group/galaxy-gxa-tools-setup’s past year of commit activity
    Python 0 2 0 0 Updated Jun 4, 2024
  • scxa-workflows Public

    Higher level repo for aggregating all of Atlas workflow logic for Single Cell

    ebi-gene-expression-group/scxa-workflows’s past year of commit activity
    Shell 13 Apache-2.0 2 5 2 Updated May 30, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…