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37 followers · 15 following · 12
  • EMBL-EBI
  • Hinxton, Cambridge, UK

Highlights

  • Arctic Code Vault Contributor
  • Pro

Organizations

@galaxyproject @BioContainers @phnmnl @bioconda @ebi-gene-expression-group

Popular repositories

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    Deployment of Galaxy on Kubernetes through Helm Charts

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903 contributions in the last year

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Contribution activity

February 2021

Created 27 commits in 11 repositories

Created a pull request in galaxyproject/galaxy that received 4 comments

Check for binary files at the middle of the file instead of at the beginning

This PR aims to deal with #11420, where certain binary files are not recognised as such because the have long text headers (>1024 bytes). Here we r…

+6 −0 • 4 comments
Opened 6 other pull requests in 5 repositories
ebi-gene-expression-group/container-galaxy-sc-tertiary
1 open 1 merged
ebi-gene-expression-group/experiment_metadata
1 merged
ebi-gene-expression-group/r-seurat-scripts
1 open
ebi-gene-expression-group/MAGE-Tab-merger
1 merged
galaxyproject/galaxy
1 merged
Reviewed 16 pull requests in 10 repositories
ebi-gene-expression-group/atlas-schemas 3 pull requests
ebi-gene-expression-group/index-gxa 3 pull requests
ebi-gene-expression-group/experiment_metadata 2 pull requests
ebi-gene-expression-group/atlas-annotations-ensembl 2 pull requests
bioconda/bioconda-recipes 1 pull request
ebi-gene-expression-group/db-scxa 1 pull request
ebi-gene-expression-group/BioSolr 1 pull request
ebi-gene-expression-group/index-scxa 1 pull request
ebi-gene-expression-group/atlas-conda 1 pull request
bigbio/proteomics-metadata-standard 1 pull request

Created an issue in galaxyproject/galaxy that received 9 comments

Binary files with long chunks of initial non-binary contents fail to be detected as binary.

Flow cytometry fcs files have a long text header before the binary portion starts (https://en.wikipedia.org/wiki/Flow_Cytometry_Standard), in parti…

9 comments
Opened 2 other issues in 2 repositories
ebi-gene-expression-group/container-galaxy-sc-tertiary
1 open
galaxyproject/galaxy-docker-k8s
1 open
11 contributions in private repositories Feb 3 – Feb 25

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