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Feat/sim search b2f backup before merge rebase #78

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wants to merge 34 commits into from
Closed

Feat/sim search b2f backup before merge rebase #78

wants to merge 34 commits into from

Commits on May 7, 2024

  1. wip sim search integration

    @moilerat
    moilerat committed May 7, 2024
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  2. move feature extraction to import

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  3. - JsonDict -> List[Dict]

    @bea777515 @moilerat
    bea777515 authored and moilerat committed May 7, 2024
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  4. samples are not correct, we need to have a similar endpoint for simil… 

    …arity search to object_set/{project_id}/query
    @moilerat
    moilerat committed May 7, 2024
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  5. typo in endpoint that doesn't explain the fact it is not reachable fr… 

    …om front to be continued....
    @moilerat
    moilerat committed May 7, 2024
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  6. add seed_object_id in filter to get them in api on back

    @moilerat
    moilerat committed May 7, 2024
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  7. I would rather put out of github the .idea

    @moilerat
    moilerat committed May 7, 2024
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  8. fix typo in endpoint

    @moilerat
    moilerat committed May 7, 2024
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  9. first working version of unsupervised search in ecotaxa by lovnower, wip

    @moilerat
    moilerat committed May 7, 2024
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  10. cleaning

    @moilerat
    moilerat committed May 7, 2024
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  11. fix conflict in db writer when rebasing master on sim_search

    @moilerat
    moilerat committed May 7, 2024
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  12. add basic similarity search as a job + test

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  13. attempt to fix import bug in simsearch test

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  14. add filters to similarity search

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  15. remove print and broken test

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  16. launch feature extraction job before similarity search

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  17. add similarity scores + test similarity search with filters on taxo

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  18. fix filters bug

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  19. replace function used in similarity search endpoint

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  20. remove limit to similarity search results set by the object_set query

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  21. remove prints

    @emmaamblard @moilerat
    emmaamblard authored and moilerat committed May 7, 2024
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  22. add blank new line in README to test right to commit and config of lo… 

    …cal repo on lovnower@niko by VR
    @moilerat
    Victor Reutenauer authored and moilerat committed May 7, 2024
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  23. first version script upgrade db with alchemy

    @moilerat
    Victor Reutenauer authored and moilerat committed May 7, 2024
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  24. mention emma and lovnower for ss and cnnvector in license (only comme… 

    …nt change) https://app.clickup.com/t/86bwqp6jp
    @moilerat
    moilerat committed May 7, 2024
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  25. fix check that cnn_features are selected https://github.com/ecotaxa/e… 

    …cotaxa_back/pull/72/files/64579a46644272002e96bae7b255c960d41ba80f#diff-94bbcc1b33ad7aae0725c6a86f78b32f40d8686cfe46c8594267baefb504c73a
    @moilerat
    moilerat committed May 7, 2024
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  26. trying to take into account @grololo remark #72

    @moilerat
    moilerat committed May 7, 2024
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  27. update test value for missing descriptors in test ss #72

    @moilerat
    Victor Reutenauer authored and moilerat committed May 7, 2024
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  28. change version migration after following different advice

    @moilerat
    Victor Reutenauer authored and moilerat committed May 7, 2024
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  29. remove blank line to force github actions that weren't trigge by chan… 

    …ge in their config
    @moilerat
    moilerat committed May 7, 2024
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  30. remove useless migration create and drop linked to 'scories' with R i… 

    …n pg
    @moilerat
    moilerat committed May 7, 2024
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  31. remove 'scories' due to different management of password in prod and … 

    …dev (from my own's understanding)
    @moilerat
    moilerat committed May 7, 2024
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  32. script migrate data cnnfeature vector

    @moilerat
    moilerat committed May 7, 2024
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  33. accept theirs

    @moilerat
    moilerat committed May 7, 2024
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  34. fix: upgrade script for new pgvector table

    @grololo06 @moilerat
    grololo06 authored and moilerat committed May 7, 2024
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