CAGExploreR

Installation - Automatic

setRepositories(ind=1:6)

install.packages("CAGExploreR")

Intallation - Manual

First install packages from Bioconductor

source("http://bioconductor.org/biocLite.R")

biocLite(c("edgeR","biomaRt","GenomicFeatures"))

Then packages from CRAN

install.packages(c("R2HTML","data.table","rbamtools"))

install.packages("CAGExploreR")

Loading the package

library(CAGExploreR)

To view PDF guide after loading

vignette("CAGExploreR")