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Made changes as discussed in meeting 30 Aug for #58
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henrietteharmse committed Aug 31, 2023
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18 changes: 18 additions & 0 deletions template/Biobank.md
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Expand Up @@ -88,3 +88,21 @@ a URL where this information can be found.

> **Recommendation** Specifying a value for this field is `recommended`
## Identifier
A unique identifier of the item. Recommended practice is to identify the resource by means of a string
conforming to an identification system. Examples include International Standard Book Number (ISBN),
Digital Object Identifier (DOI), and Uniform Resource Name (URN). Persistent identifiers should be
provided as HTTP URIs.
> **Warning** This field is `required`
## ContactPoint
Relevant [contact information](ContactPoint.md) for this biobank.
> **Warning** This field is `required`
## Issued
The date on which this biobank was created
> **Warning** This field is `required`
## Modified
The date on which this biobank was updated or same as issue date if it has not been modified.
> **Warning** This field is `required`
20 changes: 20 additions & 0 deletions template/Catalog.md
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Expand Up @@ -88,3 +88,23 @@ An ODRL conformant policy expressing the rights associated with the resource. Th
a URL where this information can be found.

> **Recommendation** Specifying a value for this field is `recommended`
>
## Identifier
A unique identifier of the item. Recommended practice is to identify the resource by means of a string
conforming to an identification system. Examples include International Standard Book Number (ISBN),
Digital Object Identifier (DOI), and Uniform Resource Name (URN). Persistent identifiers should be
provided as HTTP URIs.
> **Warning** This field is `required`
## ContactPoint
Relevant [contact information](ContactPoint.md) for this patient registry.
> **Warning** This field is `required`
## Issued
The date on which this patient registry was created
> **Warning** This field is `required`
## Modified
The date on which this patient registry was updated or same as issue date if it has not been modified.
> **Warning** This field is `required`
11 changes: 11 additions & 0 deletions template/ContactPoint.md
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@@ -0,0 +1,11 @@
# Contact Point
Provides contact information for a metadata resource.

## Name
Name of person or organization to contact.

## Telephone
A string representing a telephone number

## Email
The email address as a mailto URI
22 changes: 21 additions & 1 deletion template/DataService.md
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Expand Up @@ -88,4 +88,24 @@ point to a URL where this information can be found.
An ODRL conformant policy expressing the rights associated with the resource. This should point to
a URL where this information can be found.

> **Recommendation** Specifying a value for this field is `recommended`
> **Recommendation** Specifying a value for this field is `recommended`

## Identifier
A unique identifier of the item. Recommended practice is to identify the resource by means of a string
conforming to an identification system. Examples include International Standard Book Number (ISBN),
Digital Object Identifier (DOI), and Uniform Resource Name (URN). Persistent identifiers should be
provided as HTTP URIs.
> **Warning** This field is `required`
## ContactPoint
Relevant [contact information](ContactPoint.md) for this dataset.
> **Warning** This field is `required`
## Issued
The date on which this dataset was created
> **Warning** This field is `required`
## Modified
The date on which this dataset was updated or same as issue date if it has not been modified.
> **Warning** This field is `required`
26 changes: 24 additions & 2 deletions template/Dataset.md
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Expand Up @@ -43,7 +43,8 @@ http://purl.obolibrary.org/obo/CLO_0037308.
> **Warning** This field is `required`
## ConformsTo
The IRI of the ontology this dataset adheres to and from which concepts are used in defining the Theme for this dataset.
The IRI of the ontology or data format standard that this dataset adheres to and from which concepts are used in defining
the Theme for this dataset.
> **Recommendation** Specifying a value for this field is `recommended`
## VPConnection
Expand Down Expand Up @@ -120,4 +121,25 @@ point to a URL where this information can be found.
An ODRL conformant policy expressing the rights associated with the resource. This should point to
a URL where this information can be found.

> **Recommendation** Specifying a value for this field is `recommended`
> **Recommendation** Specifying a value for this field is `recommended`
## Identifier
A unique identifier of the item. Recommended practice is to identify the resource by means of a string
conforming to an identification system. Examples include International Standard Book Number (ISBN),
Digital Object Identifier (DOI), and Uniform Resource Name (URN). Persistent identifiers should be
provided as HTTP URIs.
> **Warning** This field is `required`
## ContactPoint
Relevant [contact information](ContactPoint.md) for this dataset.
> **Warning** This field is `required`
## Issued
The date on which this dataset was created
> **Warning** This field is `required`
## Modified
The date on which this dataset was updated or same as issue date if it has not been modified.
> **Warning** This field is `required`

3 changes: 2 additions & 1 deletion template/Distribution.md
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Expand Up @@ -58,4 +58,5 @@ point to a URL where this information can be found.
An ODRL conformant policy expressing the rights associated with the resource. This should point to
a URL where this information can be found.

> **Recommendation** Specifying a value for this field is `recommended`
> **Recommendation** Specifying a value for this field is `recommended`
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21 changes: 20 additions & 1 deletion template/Guideline.md
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Expand Up @@ -71,4 +71,23 @@ point to a URL where this information can be found.
An ODRL conformant policy expressing the rights associated with the resource. This should point to
a URL where this information can be found.

> **Recommendation** Specifying a value for this field is `recommended`
> **Recommendation** Specifying a value for this field is `recommended`
## Identifier
A unique identifier of the item. Recommended practice is to identify the resource by means of a string
conforming to an identification system. Examples include International Standard Book Number (ISBN),
Digital Object Identifier (DOI), and Uniform Resource Name (URN). Persistent identifiers should be
provided as HTTP URIs.
> **Warning** This field is `required`
## ContactPoint
Relevant [contact information](ContactPoint.md) for this guideline.
> **Warning** This field is `required`
## Issued
The date on which this guideline was created
> **Warning** This field is `required`
## Modified
The date on which this guideline was updated or same as issue date if it has not been modified.
> **Warning** This field is `required`
18 changes: 18 additions & 0 deletions template/PatientRegistry.md
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Expand Up @@ -88,3 +88,21 @@ a URL where this information can be found.

> **Recommendation** Specifying a value for this field is `recommended`
## Identifier
A unique identifier of the item. Recommended practice is to identify the resource by means of a string
conforming to an identification system. Examples include International Standard Book Number (ISBN),
Digital Object Identifier (DOI), and Uniform Resource Name (URN). Persistent identifiers should be
provided as HTTP URIs.
> **Warning** This field is `required`
## ContactPoint
Relevant [contact information](ContactPoint.md) for this patient registry.
> **Warning** This field is `required`
## Issued
The date on which this patient registry was created
> **Warning** This field is `required`
## Modified
The date on which this patient registry was updated or same as issue date if it has not been modified.
> **Warning** This field is `required`
14 changes: 9 additions & 5 deletions template/README.md
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Expand Up @@ -16,19 +16,23 @@ the resources need to be registered first. To add an organisation or organisatio
filled in. For each organisation, the biobanks, patient registries, guidelines, datasets (which may have associated
data services) or data services (with no specific dataset), provided by the organisation, needs to be added.
1. [Biobank](Biobank.md) - This sheet only needs to be filled in when your organisation
provides biobank data.
provides biobank data. The [contact point](ContactPoint.md) for this biobank needs to be added if it has not already been added.
2. [Patient registry](PatientRegistry.md) - This sheet only needs to be filled in when your organisation
provides patient registry data.
3. [Guideline](Guideline.md) - This sheet only needs to be filled in when your organisation provides guidelines.
provides patient registry data. The [contact point](ContactPoint.md) for this patient registry needs to be added if it has not already been added.
3. [Guideline](Guideline.md) - This sheet only needs to be filled in when your organisation provides guidelines.
The [contact point](ContactPoint.md) for this guideline needs to be added if it has not already been added.
4. [Dataset](Dataset.md) - This sheet needs to be filled only when your organisation provides access to 1 or more datasets.
This sheet captures details about your dataset(s). However, a single dataset can have different ways in which they
are made available to potential users. How a dataset can be accessed is defined in the Distribution sheet.
1. [Distribution](Distribution.md) - A single dataset can be made available in different ways. I.e., it can be downloaded or
it can be accessed online.
The [contact point](ContactPoint.md) for this dataset needs to be added if it has not already been added.
5. [Data Service](DataService.md) - If your organisation provides a service for its dataset to browse or search the
dataset across different versions of the dataset, this sheet needs to be filled in.
dataset across different versions of the dataset, this sheet needs to be filled in. The [contact point](ContactPoint.md) for
this data service needs to be added if it has not already been added.
2. [Catalog](Catalog.md) - If your organisation wants to bundle numerous datasets, data services, biobanks, patient registries
or guidelines together under a single title, you need to fill in this sheet.
or guidelines together under a single title, you need to fill in this sheet. The [contact point](ContactPoint.md) for this
catalog needs to be added if it has not already been added.


## Step 3
Expand Down

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