BioInformatics Assignments

My Bioinformatic Coding assignments.

First Assignment

Performing Semi Global Alignment on two protein sequences, using PAM250 as the scoring matrix.

Performing MSA on sequences using C-STAR MSA algorithm.

Creating a profile based on a given MSA and then find the sequence which has the highest score based on the profile matrix.'

Classification of different DNA sequnences of viruses into 6 classes, using a Conv-net.

Name		Name	Last commit message	Last commit date
Latest commit History 8 Commits
.gitattributes		.gitattributes
README.md		README.md
bio_project.ipynb		bio_project.ipynb
profile.py		profile.py
semiglobal_alignment.py		semiglobal_alignment.py
star_msa_alignment.py		star_msa_alignment.py