BioInformatics Assignments

My Bioinformatic Coding assignments.

First Assignment

Performing Semi Global Alignment on two protein sequences, using PAM250 as the scoring matrix.

Second Assignment

Performing MSA on sequences using C-STAR MSA algorithm.

Third Assignment

Creating a profile based on a given MSA and then find the sequence which has the highest score based on the profile matrix.'

Final Project

Classification of different DNA sequnences of viruses into 6 classes, using a Conv-net.