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bio.tools & EDAM session topics (PLACEHOLDER) #3

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joncison opened this issue Jun 18, 2018 · 4 comments
Closed
1 of 14 tasks

bio.tools & EDAM session topics (PLACEHOLDER) #3

joncison opened this issue Jun 18, 2018 · 4 comments

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@joncison
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joncison commented Jun 18, 2018

This a placeholder issue for discussion around the "bio.tools & EDAM drop-in hackathon & discussions" session at the ELIXIR BioHackathon (http://bh2018paris.info/) on Nov 12-16.

Please suggest and discuss topics for the event here.

There may be a bit of funding to support travel, for non-ELIXIR people (details tbd)

cc @hmenager @matuskalas @hansioan @piotrgithub1 @khillion @Ahto123 @krab1k @albangaignard @magnuspalmblad @annalenalamprecht @veitveit @jaanisoe @bgruening

Please tick here if you'll attend the event (of if you want to but are not listed, ping me here):

  • joncison
  • hmenager
  • matuskalas
  • hansioan
  • piotrgithub1
  • khillion
  • Ahto123
  • krab1k
  • albangaignard
  • magnuspalmblad
  • annalenalamprecht
  • veitveit
  • jaanisoe
  • bgruening
@bgruening
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  • building a developer community around the soon to be open sources bio.tools project (and friends)
    • Governance
    • Contributing
    • Code of Conduct
  • How to integrate crawling and pulling data into bio.tools
    • can we build a plugin-mechanism, so that other communities can write crawlers and annotate tools automatically
  • Reviewing all issues and prioritize them

@joncison
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heads up @hmenager @matuskalas @hansioan @piotrgithub1 @khillion @Ahto123 @krab1k @albangaignard @magnuspalmblad @annalenalamprecht @veitveit @jaanisoe @bgruening

the outline of the sessions is done:
https://github.com/elixir-europe/BioHackathon/tree/master/tools/bio.tools%20%26%20EDAM%20drop-in%20hackathon%20%26%20discussions

hope to see some of you there

I included your suggestions Bjoern (2 as hacking topics, one as a "maybe")

@AlasdairGray
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@joncison will you be looking to

  1. Expose Bioschemas markup through bio.tools
  2. Ingest Bioschemas markup for creating a new entry
  3. Generate Bioschemas markup for inclusion on a tool's own web page

@joncison
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probably not during the hackathon

In the longer term, 1. and 3. for sure, sooner rather than later assuming the Bioschema tool spec is a subset of the biotoolsSchema JSON-LD / RDF-XML serialisation that is already in the pipe (cc @albangaignard @matuskalas) : ensuring this happens is much easier if I'm leading the Bioschema tool spec activity (as proposed by @rajido, which I'd be happy to do)

2. is a longer-term thing for various reasons

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