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Preparation of release 1.2.3 #31

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FrancescoVit opened this issue Jan 19, 2022 · 0 comments
Closed
11 tasks done

Preparation of release 1.2.3 #31

FrancescoVit opened this issue Jan 19, 2022 · 0 comments
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@FrancescoVit
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FrancescoVit commented Jan 19, 2022

Issue used to keep track of the preparation to next release

Prepare new import file

  • prepare ontofox input file; one separated input for each ontology
  • run ontofox; obtain one separated owl for each ontology
  • run robot merge 1) on all single ontology owl file 2) with previous version import
    robot merge --inputs "*_import.owl" --output ONS_import_01192022.owl
    robot merge --input ONS_imports.owl --input ONS_import_01192022.owl --output ONS_import_01192022.owl
  • remove obsolete (ref. http://robot.obolibrary.org/remove.html)
    obot remove --input ONS_import_01192022.owl --select "owl:deprecated='true'^^xsd:boolean" --output ontofox_import_01192022_noDeprec.owl

QC of imports

  • check placement of imported classes
  • remove obsolete classes (see above)

New class addition

  • create new classes (for a list see this google doc)
  • define exioms

Release

  • copy ons-edit.owl to main, rename in ons.owl
  • creade ons.obo
  • make release
@FrancescoVit FrancescoVit self-assigned this Jan 19, 2022
FrancescoVit added a commit that referenced this issue Jan 19, 2022
FrancescoVit added a commit that referenced this issue Jan 20, 2022
Multiple changes:
1) a separated ontofox input file was created for each ontology
2) multiple obtained owl ontologies from ontofox were merged with robot merge
3) this was merged with old version import file with robot merge
4) obsolete terms were removed
FrancescoVit added a commit that referenced this issue Jan 20, 2022
FrancescoVit added a commit that referenced this issue Jan 21, 2022
FrancescoVit added a commit that referenced this issue Jan 23, 2022
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