Issue #784 - Add an entry for the scoringutils paper on the pkgdown s…

…ite (#797)

* Make heatmap plot readable

* Update pkgdown site to include link to scoringutils paper

* add articles section back in

_pkgdown.yml

@@ -16,6 +16,14 @@ authors:
   Sam Abbott:
     href: "https://www.samabbott.co.uk/"
 
+navbar:
+  structure:
+    left: [reference, paper, articles, changelog]
+    right: [search, github]
+  components:
+    paper:
+      text: "scoringutils paper"
+      href: https://raw.githubusercontent.com/epiforecasts/scoringutils/main/inst/manuscript/manuscript.pdf
 
 reference:
         - title: Package documentation

inst/manuscript/manuscript.Rmd

@@ -537,6 +537,9 @@ example_sample_continuous[horizon == 2] |>
   as_forecast() |>
   score() |>
   summarise_scores(by = c("model", "location", "target_type")) |>
+  summarise_scores(
+    by = c("model", "location", "target_type"), 
+    fun = signif, digits = 2) |>
   plot_heatmap(x = "location", metric = "bias") + 
     facet_wrap(~ target_type) 
 ```

inst/manuscript/manuscript.tex

@@ -1219,6 +1219,9 @@ \subsubsection{Heatmaps}\label{heatmaps}
 +   as_forecast() |>
 +   score() |>
 +   summarise_scores(by = c("model", "location", "target_type")) |>
++   summarise_scores(
++     by = c("model", "location", "target_type"), 
++     fun = signif, digits = 2) |>
 +   plot_heatmap(x = "location", metric = "bias") + 
 +     facet_wrap(~ target_type) 
 \end{CodeInput}