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28 Open 17 Closed
28 Open 17 Closed
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Issues list

make cluster validation using indices optional enhancement New feature or request
#46 opened Mar 4, 2024 by sreichl
@sreichl
Error plot_dimred_metadata bug Something isn't working
#45 opened Feb 29, 2024 by bednarsky
@sreichl
1
UMAP diagnostics bug - numba intersect1d bug Something isn't working
#44 opened Feb 29, 2024 by bednarsky
@sreichl
3
snakemake找不到srcdir函数 bug Something isn't working
#43 opened Feb 5, 2024 by summersohot
@sreichl
5
consider adding CartoGRAPHs for visualization and DataDiVR export for VR based analysis enhancement New feature or request
#42 opened Jan 27, 2024 by sreichl
2 tasks
@sreichl
diagnostic plot of all aggregated clustering results enhancement New feature or request
#41 opened Dec 20, 2023 by sreichl
1 task
new minor release when adapted to very large data documentation Improvements or additions to documentation
#39 opened Dec 18, 2023 by sreichl
1 of 4 tasks
@sreichl
fix PCA pairplot by limiting legend exist only when less than X classes eg 10? bug Something isn't working
#38 opened Dec 18, 2023 by sreichl
@sreichl
improve data loading speed with Dask or NumPy enhancement New feature or request
#37 opened Dec 15, 2023 by sreichl
@sreichl
improve scatter plot speed enhancement New feature or request
#36 opened Dec 15, 2023 by sreichl
@sreichl
1
reimplement internal cluster indices supporting different metrics and to improve performance enhancement New feature or request
#33 opened Oct 3, 2023 by sreichl
@sreichl
add Variation of Information (VI) and Split/Join as external indices enhancement New feature or request
#31 opened Sep 27, 2023 by sreichl
@sreichl
implement Manifold trustworthiness enhancement New feature or request
#30 opened Sep 22, 2023 by sreichl
@sreichl
implement significance analysis for clustering enhancement New feature or request
#29 opened Sep 18, 2023 by sreichl
@sreichl
1
clustification: add visualization of performance/convergence over time enhancement New feature or request
#28 opened Sep 13, 2023 by sreichl
@sreichl
1
Resampling to evaluate clustering stability enhancement New feature or request
#27 opened Sep 13, 2023 by bednarsky
@sreichl
clustree: investigate and implement automatic sc3 stability scoring enhancement New feature or request
#24 opened Sep 6, 2023 by sreichl
@sreichl
implement consensus cluster calling enhancement New feature or request
#22 opened Aug 29, 2023 by sreichl
@sreichl
1
PCA: additional visualization of top loadings per PC enhancement New feature or request
#18 opened Aug 27, 2023 by sreichl
@sreichl
implement meta visualization as an aggregation of all methods (PCA, densMAP, UMAP, …) enhancement New feature or request
#16 opened Aug 26, 2023 by sreichl
@sreichl
add Dynamic visualization of high-dimensional data enhancement New feature or request
#15 opened Aug 26, 2023 by sreichl
@sreichl
implement partition based clustering enhancement New feature or request
#14 opened Aug 26, 2023 by sreichl
@sreichl
Consider alternative clustering algorithms enhancement New feature or request
#13 opened Aug 25, 2023 by sreichl
@sreichl
Benchmark clf-based clustering approach enhancement New feature or request
#12 opened Aug 25, 2023 by sreichl
@sreichl
5
implement HDBSCAN clustering enhancement New feature or request
#6 opened Aug 25, 2023 by sreichl
@sreichl
ProTip! no:milestone will show everything without a milestone.