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Add system dependency instruction #124

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merged 4 commits into from
Feb 14, 2024
Merged

Add system dependency instruction #124

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060a272
Update README.md
chartgerink Jan 31, 2024
f050457
Add `cmake`
chartgerink Jan 31, 2024
236463e
Add system dependencies to report information
chartgerink Feb 1, 2024
80c31d8
Update inst/rmarkdown/templates/transmissibility/skeleton/skeleton.Rmd
chartgerink Feb 14, 2024
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12 changes: 12 additions & 0 deletions README.md
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Expand Up @@ -54,6 +54,18 @@ episoap::list_templates()
#> [1] "transmissibility"
```

### System dependencies

You may need to install system dependencies:

```
# macOS
brew install libsodium cmake

# Linux (Debian based)
apt install libsodium-dev cmake
```

## Related projects

This project has some overlap with other R packages:
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14 changes: 14 additions & 0 deletions inst/rmarkdown/templates/transmissibility/skeleton/skeleton.Rmd
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Expand Up @@ -241,6 +241,20 @@ dark_pink <- "#B45D75"
theme_set(theme_episoap())
```

<!--
### System dependencies

You may need to install system dependencies to be able to generate this report:

```sh
# macOS
brew install libsodium cmake

# Linux (Debian based)
apt install libsodium-dev cmake
```
-->

## Importing the data

To illustrate the different analyses, we use real data reporting daily numbers
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