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Achievement: Pair ExtraordinaireAchievement: Arctic Code Vault ContributorAchievement: Pull Shark
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  1. yannikschaelte/dfba_tests yannikschaelte/dfba_tests Public

    Python 2

  2. de_analysis de_analysis Public

    Distribution-free differential expression analysis for multi-patients-groups for scRNA-seq data

    Python

  3. scverse/scanpy scverse/scanpy Public

    Single-cell analysis in Python. Scales to >1M cells.

    Python 1.8k 593

  4. ICB-DCM/pyPESTO ICB-DCM/pyPESTO Public

    python Parameter EStimation TOolbox

    Python 211 47

  5. PEtab-dev/PEtab PEtab-dev/PEtab Public

    PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology

    57 12

  6. Benchmarking-Initiative/Benchmark-Models-PEtab Benchmarking-Initiative/Benchmark-Models-PEtab Public

    A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling

    Python 26 14