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Additional LB test cases #2748

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2 changes: 2 additions & 0 deletions testsuite/python/CMakeLists.txt
Expand Up @@ -189,6 +189,8 @@ python_test(FILE lb_boundary.py MAX_NUM_PROC 2 LABELS gpu)
python_test(FILE lb_streaming.py MAX_NUM_PROC 4 LABELS gpu)
python_test(FILE lb_shear.py MAX_NUM_PROC 2 LABELS gpu)
python_test(FILE lb_thermostat.py MAX_NUM_PROC 2 LABELS gpu)
python_test(FILE lb_buoyancy_force.py MAX_NUM_PROC 2 LABELS gpu)
python_test(FILE lb_momentum_conservation.py MAX_NUM_PROC 2 LABELS gpu)
python_test(FILE p3m_electrostatic_pressure.py MAX_NUM_PROC 2)
python_test(FILE sigint.py DEPENDENCIES sigint_child.py MAX_NUM_PROC 1)
python_test(FILE lb_density.py MAX_NUM_PROC 1)
Expand Down
117 changes: 117 additions & 0 deletions testsuite/python/lb_buoyancy_force.py
@@ -0,0 +1,117 @@
# Copyright (C) 2010-2018 The ESPResSo project
#
# This file is part of ESPResSo.
#
# ESPResSo is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# ESPResSo is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.

import espressomd
from espressomd import lb, lbboundaries, shapes, has_features
import unittest as ut
import numpy as np
import sys

# Define the LB Parameters
TIME_STEP = 0.01
AGRID = 0.5
KVISC = 6
DENS = 2
G = 0.08
BOX_SIZE = 27 * AGRID

LB_PARAMS = {'agrid': AGRID,
'dens': DENS,
'visc': KVISC,
'tau': TIME_STEP,
'ext_force_density': [0, DENS * G, 0]}
# System setup
radius = 8 * AGRID


class Buoyancy(object):
lbf = None
system = espressomd.System(box_l=[BOX_SIZE] * 3)
system.time_step = TIME_STEP
system.cell_system.skin = 0.01

def test(self):
self.system.actors.clear()
self.system.lbboundaries.clear()
self.system.actors.add(self.lbf)

# Setup walls
for i in range(3):
n = np.zeros(3)
n[i] = 1
self.system.lbboundaries.add(
lbboundaries.LBBoundary(shape=shapes.Wall(
normal=-n, dist=-(self.system.box_l[i] - AGRID))))

self.system.lbboundaries.add(lbboundaries.LBBoundary(
shape=shapes.Wall(
normal=n, dist=AGRID)))

# setup sphere without slip in the middle
sphere = lbboundaries.LBBoundary(shape=shapes.Sphere(
radius=radius, center=self.system.box_l / 2, direction=1))

self.system.lbboundaries.add(sphere)

expected_force = np.array(
[0, -4. / 3. * np.pi * radius**3 * DENS * G, 0])
last_force = -999999
self.system.integrator.run(100)
while True:
self.system.integrator.run(10)
force = np.linalg.norm(sphere.get_force())

if np.linalg.norm(force - last_force) < 0.01:
break
last_force = force

# Check force balance
boundary_force = np.zeros(3)
for b in self.system.lbboundaries:
boundary_force += b.get_force()
applied_force = ((BOX_SIZE - AGRID)**3 - 4. / 3. * np.pi * radius**3) * \
np.array(LB_PARAMS['ext_force_density'])
np.testing.assert_allclose(
boundary_force,
applied_force,
rtol=6E-2,
atol=0.08 * np.linalg.norm(applied_force))
force = np.copy(sphere.get_force())
np.testing.assert_allclose(
force, expected_force,
rtol=0.03,
atol=np.linalg.norm(expected_force) * 0.03)


@ut.skipIf(not espressomd.gpu_available() or not espressomd.has_features(
['LB_GPU', 'LB_BOUNDARIES_GPU', 'EXTERNAL_FORCES']), "Skipping test due to missing features.")
class LBGPUBuoyancy(ut.TestCase, Buoyancy):

def setUp(self):
self.lbf = espressomd.lb.LBFluidGPU(**LB_PARAMS)


@ut.skipIf(not espressomd.has_features(
['LB', 'LB_BOUNDARIES', 'EXTERNAL_FORCES']), "Skipping test due to missing features.")
class LBCPUBuoyancy(ut.TestCase, Buoyancy):

def setUp(self):
self.lbf = espressomd.lb.LBFluid(**LB_PARAMS)


if __name__ == "__main__":
ut.main()
95 changes: 95 additions & 0 deletions testsuite/python/lb_momentum_conservation.py
@@ -0,0 +1,95 @@
# Copyright (C) 2010-2018 The ESPResSo project
#
# This file is part of ESPResSo.
#
# ESPResSo is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# ESPResSo is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.

import espressomd
from espressomd import lb, lbboundaries, shapes, has_features
import unittest as ut
import numpy as np
import sys

# Define the LB Parameters
TIME_STEP = 0.01
AGRID = 0.5
KVISC = 6
DENS = 0.5

F = 0.013
BOX_SIZE = 10 * AGRID

LB_PARAMS = {'agrid': AGRID,
'dens': DENS,
'visc': KVISC,
'tau': TIME_STEP,
'ext_force_density': [0, F, 0]}


class Momentum(object):
lbf = None
system = espressomd.System(box_l=[BOX_SIZE] * 3)
system.time_step = TIME_STEP
system.cell_system.skin = 0.01

def test(self):
self.system.actors.clear()
self.system.part.clear()
self.system.actors.add(self.lbf)
self.system.thermostat.set_lb(LB_fluid=self.lbf, gamma=1, seed=1)

applied_force = self.system.volume() * np.array(
LB_PARAMS['ext_force_density'])
p = self.system.part.add(pos=(0, 0, 0), ext_force=-applied_force)

# Reach steady state
self.system.integrator.run(700)
v_final = np.copy(p.v)

for i in range(3):
self.system.integrator.run(100)

# Check that particle momentum =-fluid momenum
# up to the momentum trnasferred in 1/2 time step
np.testing.assert_allclose(
p.v * p.mass, -
np.array(
self.system.analysis.analyze_linear_momentum(
include_particles=False)),
atol=np.linalg.norm(applied_force) * TIME_STEP * 0.55)
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# Check that particle velocity is stationary
# up to the acceleration of 1/2 time step
np.testing.assert_allclose(np.copy(p.v), v_final,
atol=np.linalg.norm(applied_force) / p.mass * TIME_STEP * 0.55)


@ut.skipIf(not espressomd.gpu_available() or not espressomd.has_features(
['LB_GPU', 'LB_BOUNDARIES_GPU', 'EXTERNAL_FORCES']), "Skipping test due to missing features.")
class LBGPUMomentum(ut.TestCase, Momentum):

def setUp(self):
self.lbf = espressomd.lb.LBFluidGPU(**LB_PARAMS)


@ut.skipIf(not espressomd.has_features(
['LB', 'LB_BOUNDARIES', 'EXTERNAL_FORCES']), "Skipping test due to missing features.")
class LBCPUMomentum(ut.TestCase, Momentum):

def setUp(self):
self.lbf = espressomd.lb.LBFluid(**LB_PARAMS)


if __name__ == "__main__":
ut.main()