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migrate intramolecular bits to direct sampling from overlap #616

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migrate intramolecular bits to direct sampling from overlap

migrate intramolecular bits to direct sampling from overlap #616

Run time

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Job Run time
Build and test on ubuntu-latest
1m 27s
Build and test on macos-latest
2m 39s
Build and test on windows-latest
1m 58s
6m 4s