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SLPA_ce20180130b.ipf
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SLPA_ce20180130b.ipf
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#pragma rtGlobals=3 // Use modern global access method and strict wave access.
/////////////////////////////////////
//////////CHANGE LOG/////////////////
////////////////////////////////////
//SLPA ver. ce20180130b.ipf
// - [DXPS] Initialize the selected dispersive line (vertical line in the middle)
//SLPA ver. ce20180130a.ipf
// - [DXPS] Ask whether user wants to overwrite the wave when exporting the plot
//SLPA ver. ce20180116a.ipf
// - [DXPS] Check whether the selected scan name is duplicated or not.
//SLPA ver. ce20171227a.ipf
// - [DXPS] Bug fix - Newly loaded scan is selected after the load finish.
//SLPA ver. ce20171030a.ipf
// - [DXPS] Bug fix - add the auto detection of STV start, STV step from .txt file in the DXPS scan.
//SLPA ver. ce20170920a.ipf
// - [IXPS] Bug fix - Extract LEEM Cutoff - previously MapVol size is only 1 layer and only collect the first parameter. Corrected now.
//SLPA ver. ce20170906d.ipf
// - [LL] Note field is now editable. Can make note for individual image
//SLPA ver. ce20170906c.ipf
// - [Util] Ask user to find SLP_Auger_W.ibw or SLP_BE_W.ibw if they have not been loaded to the current Igor folder.
//SLPA ver. ce20170906b.ipf
// - [DXPS] Add Auger data to peak assignment
// - [IXPS] Add Auger data to peak assignment
//SLPA ver. ce20170906a.ipf
// - [LL] Bug fix - Display preview image once the 'Preview' checkbox is clicked [ListBoxProx_LL_FileList]
//SLPA ver. ce20170904a.ipf
// - [DXPS] Bug fix - Peak assignment hook function.
//SLPA ver. ce20170816b.ipf
// - [IXPS] Draw ROI manually instead of using auto- screen mask creation
//SLPA ver. ce20170816a.ipf
// - [DXPS] SLP_DXPS_RestoreRawData - If the raw data has been moved, ask user to browse for it.
//SLPA ver. ce20170815b.ipf
// - [DXPS] Peak assignment function.
//SLPA ver. ce20170815a.ipf
// - [DXPS] BE/KE display for the combined spectrum. Export to BE or KE. Prompt for analyzer's WF if no input.
//SLPA ver. ce20170728a.ipf
// - [IXPS] Fix small bugs on peak assignment/BE display function (initialize new scans)
// - [IXPS] Warn when users try to use existing volume names (incl. names used by other SLP functions) during Load Scan..
//SLPA ver. ce20170713a.ipf
// - [IXPS] Peak assignment (using BE table)
//SLPA ver. ce20170707c.ipf
// - [IXPS] Export and plot z-profile (both KE and BE)
//SLPA ver. ce20170707a.ipf
// - [IXPS] Save z-profile cursor positions for each scan
// - [IXPS] Able to switch KE<->BE scale
//SLPA ver. ce20170707a.ipf
// - [IXPS] Bug fix - Delete all scans = ok (previously didn't actually delete raw data..)
//SLPA ver. ce20170706c.ipf
// - [IXPS] Automatically detect STV start, STV step when loading IXPS,DXPS,LEEDIV,LEEMIV
//SLPA ver. ce20170706b.ipf
// - [DLA] Bug fix - Don't display anything if there is no image loaded yet
// - [UTIL] LoadMultImg2Vol can now load either .tif and .TIFF for
// - [IXPS] Bug fix - Error when 'See z-profile' is checked when loading new volume.
//SLPA ver. ce20170706a.ipf
// - [DLA] Include Diffusion Limit Aggregation analysis (SLP_DLA_ce20170504d.ipf)
//SLPA ver. ce20170629a.ipf
// - [IXPS] Can use cursor to see different z-profile in different area. First use of 'hook' function in Igor.
//SLPA ver. ce20170627a.ipf
// - [IXPS] Add 'LEEM cut-off' mapping (for rel. WF measurement with LEEM).
//SLPA ver. ce20170607a.ipf
// - [IXPS] Can now adjust Isochromaticity mathematical function (displayed in SetVar controls)
//SLPA ver. ce20170606d.ipf
// - [IXPS] Use Inversed GLA instead (for KE scale)
//SLPA ver. ce20170606c.ipf
// - [IXPS] Add 4GLAs fit function
// - [IXPS] Small bug fix on display selected param. map (applied auto-intensity)
//SLPA ver. ce20170606b.ipf
// - [IXPS] Add 3GLAs fit function
//SLPA ver. ce20170606a.ipf
// - [IXPS] adjust LLim and ULim after loading
// - [IXPS] Bug fixes for the Display/selected image vs. histogram and auto intensity adjust
//SLPA ver. ce20170430b.ipf
// - [IXPS] Change to green color
//SLPA ver. ce20170430a.ipf
// - [IXPS] Copy fit coef. from another scan
//SLPA ver. ce20170429b.ipf
// - [IXPS] Update fit mask LLim and ULim variable with scan selection
// - [IXPS] Copy screen mask from another scan (with the same bin)
//SLPA ver. ce20170429a.ipf
// - [IXPS] 1GLA fit mode added
// - [IXPS] Hold functionality for keeping fit coef. constant
//SLPA ver. ce20170424a.ipf
// - [IXPS] Improve the auto range funtionality - use median then average MatrixFilter (avg works quite well with NaN)
//SLPA ver. ce20170424a.ipf
// - [IXPS]
// - Correc the Image selection function - should work properly now
// - Do a 'low pass filter' with MatrixFilter in the 'median' mode to remove speckles. The histogram looks much better this way.
// - Automatically set the Color min/max using the LPF'ed Map
// - Update the color min/max slider and color min/max update the ParamDisplayW
// - Clean up the DisplaySel function (call the SelectImage function instead of doing it by itself)
//SLPA ver. ce20170420a.ipf
// - [NEX] Load scans.. button is now load only one scan at a time. It also checks and corrects the scan name automatically.
// - [IXPS] Auto create correction (using 2d parabolic correction function)
//SLPA
// - Load_LEEMDAT_ce20170226a.ipf
// - SLP_NEXAFS_ce20170104a.ipf
// - DispXPS_Panel_ce20170302f.ipf
// - ImgXPS_Panel_ce20170321e.ipf
// - SLP_Util_ce20170226a.ipf
//ver. ce20170104a
// - Add SLP_Load_oldLEEM_Img() - Load old .DAT file from Elmitec LEEM (before 2014)
//ver. ce20161216a
// - Add image creation date/time in the param list
//ver. ce20161215c
// - Add Image notes
// - Some cosmetic changes
// - Bug fix on deleting many DataSet
//ver. ce20161215b
// - Delete dataset is available. It warns when some images are in used. Dataset won't be deleted in that case.
//ver. ce20161214a
// - Cross-hair in the Find screen dialog (only if the x-y scale is not set). Values of new x_center and y_center can be manually changed.
// - Change Plot single image button to Plot fullsize image (required that the data file is accessible). Plot single image still works with double clicking the image name in the list
//ver. ce20161210a
// - Stitch - ROI can be modified. Mask creation window also shows selected image behind the mask.
//ver. ce20161209a
// - Add functions to scale images, find screen position, and image stitching
// - Plot the displayed image w/ description legend
// - Export selected images to TIFF files in selected folder w/ a .csv file containing image details
//[from Stitch .ipf Ver. ce20161128a.ipf
// - Work with LoadLEEM .ipf
// - Set scale for selected images in the dataset. Scale can be pixel, relative or absolute (offset with Mitutoyo X,Y reading).
//Ver. ce20161207a.ipf
// - Stitching almost works. Need algorithm for some FOV adjustment (e.g. 75um FOV is not really
//ver. ce20161119a
// - Load images (.DAT) in batch. Read and store important LEEM/PEEM parameters from the header of the image file
//ver.ce20161123a
// - User interface
// - Load sets of image and automatically save the image set.
//ver.ce20161124a
// - Bug fixed - solve the problem when the some image number is missing. Change the search algorithm in the SLP_LL_setup function (now ver.2)
// - Record no. of images in the 4th column of DatasetListW
// - Cosmetic change to the image plot display
//ver. ce20161126a
// - New dataset selection and display automatically after loading
// - Default resize option is 0.25 and is kept afterward
// - Bug fixed - parameter display update
// - Dataset name suggestion using folder name
//ver. ce20161127a
// - Warn when users use duplicated dataset name
//ver. ce20161127b
// - Remove the 128 dataset limit. ImgSetListW size is increased with added datasets
// - use 'row=" in the ListBox selection so that the selection is always visible when switching between datasets
// - Prevent users from clicking outside the range in Image and DataSet listboxes
//ver. ce20161127c
// - Image/dataset selection with SelWave
// - Select all/select none buttons for image list
//ver. ce20161127d
// - Image ctab (colour/first colour/last colour)is retained for the next image selection. It is saved for the next time the program is run
//ver. ce20170226a
// - Add new image load panel. The multiple image loading is easier and more efficient.
// - Bug fix on the deleting datasets (the previous version doesn't use /TXOP=6 in the FindValue so the deletion had been wrong
/////////////////////////////////////
/////////////TODOs/////////////////
/////////////////////////////////////
// [LEED-IV]
// - Extract IV curves from LEEM's LEED
// [UTIL]
// - Project creation
// - Auto detect/index new data
// - Auto update??
// - Report creation assist - Report panel
// [LoadLEEM]
// + Functionality
// - ***Make notes for individual images [to be used for Report Making feature]
// - **Report making
// - Record time when images have been captured
// + Bug fixes
// - Editable note column for images and dataset
// - Load TIFF&other file types as well
// - Should be able to distinguish the LEED/Disp. mode and prevent program from interrupting the processes
// - Error when all datasets are deleted
// - FOV name table <-> FOV variable
// [NEXAFS]
// - Option to load existing wave instead of from .txt file (e.g. z-profile waves extracted from [ImgXPS]
// - Fit and Global fit
// - Report creation - export to LaTeX
// - Rescale selected graph button
// - Clear all graph selections button
// - Memorise recipe parameter values
// [ImgXPS]
// - Volume data pre-processing - [z-wave] Normalize, subtraction, and [xy wave] Isochromaticity correction, brightness correction before extraction
// + Additional features *
// - Th. adj. for screen mask creation
// - Error report when scrn. msk. creation is not successful
// - Coef. real-time display for curve fitting
// - Est. time for extraction
// - Quick ext. mode (no fit display)
// - Error marking for bad fit.
// [DispXPS]
// - Fitting and Global Fitting
// - Use 'absolute' scale (in ref. to the MCP screen size).
// - Default parameters
// Bug fixes
// - Axis label disappears for both indv. and cmbn. plots
// - Disp. and P. lines display is not correct sometimes.
// [DLA]
// - Bug fixes - duplicate Voronoi cell
// - Manually movable/editable/addable island centers
/////////////////////////////////////
/////////////ARCHIVE/////////////////
/////////////////////////////////////
//CODE: DispXPSPanel
//Ver. ce20170301a
// - First working version
// - Data loaded and saved in separated folders (Raw data in one folder)
// - Adjust threshold and minimum disp. size (in pixels) to find a dispersive line automatically
// - Extract XPS spectra from different position in the disp. line (several param. can be selected in the panel)
// - Disp. factor and energy position can be calibrated in the panel
//Ver. ce20170301b
// - Can now choose Disp. line and subsequent P. lines gen. param. from another scan (helps when measuring low S/N scans, or Ef)
// - Can correct the first frame which sometimes has unusually high intensity (by copying the second frame onto it - losing 1 data point).
//Ver. ce20170301c
// - Can remove the raw data to reduce the project file size.
// - Small code clean-up
//Ver. ce20170301d
// - Can restore raw data for re-processing
//Ver. ce20170302a
// - Small bug fixes (control toggling when scan has/has no raw data
// - Select all/select none buttons
//Ver. ce20170302b
// - Export and plot results (combined spectrum only)
//Ver. ce20170302c
// - Add Scan Note (all the parameters used in the data extraction) to the exported wave
//Ver. ce20170302d
// - Bug fixed: Error when trying to adjust Disp. Factor/x0/y0 w/o raw data (removed a wave refrence to the raw data)
// - Bug fixed: Copy dispersive line from.. button -> Error conditioning with V_Flag (Continue -> V_Flag=0)
// - Bug fixed: NLines is not stored in the ScanListW! -> Fixed
// - Check ScanName and make suggestions for users to conform to Standard Wave Name. [CODE: SLP_Util_WNameCheck], [CODE: SLP_Util_WNameSuggest]
//Ver. ce20170302e
// - Manual edit of the disp. line
//Ver. ce20170302f
// - Cosmetic change - panel colour = blue
//[POS]IXPS Begin
//CODE: ImgXPSPanel
//
// Ver.ce20170310c
// - Almost working - Ver. 0.7
// - Can Load and display image volume w/ slider
// - Automatic screen mask creation
// - Loop data fitting for (binned) each pixel
// - Extraction progress (in %)
// - Load correction waves from DataBrowser window
// - Correction fine-adjustment (x,y,magnitude)
// Ver.ce20170311a
// - ListBoxProc for DisplayListW
// - ListBoxProc for XPS param ListW
// Ver.ce20170311b
// - Auto color scale/int. for the image volume/maps
// - Some fix on using the ScanList ListBox
// - properly show ImgVol or IntgImg depending on whether there is raw data stored in the project
// Ver.ce20170311d
// - Can now use slider to adjust color scale
// - Radio button to select which Image to adjust the color scale
// - Use STRUCT of the checkbox control.
// Ver.ce20170312a
// - Export/display maps
// - Still with some bugs
// - Can still extract only the cutoff (w/ ERF fit) for WF measurements
// Ver. ce20170312b
// - First working version - Ver. 1.0
// - Many bug fixes..
// Ver. ce20170317a
// - Small bug fix (automatically select newly loaded Scans, display fitted curve)
// Ver. ce20170321b
// - Can now select which fitting mode to use (2 modes - Secondary Yield Cut-off for WF measurements, and 2GLAs for isochromaticity map)
// - 'Fast Extraction' mode (much faster with /N=1 in FuncFit)
// Ver. ce20170321c
// - Adjust Threshold for finding screen
// Ver. ce20170321d
// - Clean up the windows. Move graph and control positions.
// Ver. ce20170321e
// - Init check. Bug fixes (not 100% yet)
//Igor procedure to assist BL3.2Ub operation and data analyses
//ver. ce20161031a
// - Can load, draw line, change line profile width, and plot profile and intensity vs. time plot
// - Still very buggy
//ver. ce20161107b
// - Initialize program (creating Package waves, global variables, etc.)
// - Plotting the result
// - Label and formatting graph
// - Stored and display previous image series
// - Updating line profiles with line profile width
// - Remove old line profile (bottom graph)
//ver. ce20161111a
// - Keep raw images and line profiles in separated folders
//ver. ce20170226a
// - Change name to SLP_XPS
// - Merge SLP_WF_ce20170208a.ipf (WF mapping)
// - Merge SLP_CreateDispLines_ce20170214a.ipf (Automatic dispersion line finding and multiple-point data collection for XPS)
//Current ver. ce20161114a
// Todos
// - New DataSet system (from SLP_LoadLEEM)
// - Filter for file loading (e.g. *.TIF)
// - Option to load .DAT and extract data
// - Auto calculation of dispersion (eV/pixel)
// - Show line profile width
// - Delete raw data (to save disk space)
// - Clean up the code
/////////////////////////////////////
/////////////CODE START HERE/////////
/////////////////////////////////////
Menu "SLPA"
"Load LEEM images..",SLP_LL_CreatePanel01()
"Load NEXAFS scans..",SLP_NEX_CreatePanel()
"Imaging XPS..",SLP_IXPS_CreatePanel1()
"Dispersive XPS..",SLP_DXPS_CreatePanel1()
"DLA analysis..",SLP_DLA_CreatePanel01()
End
Function SLP_LL_CreatePanel01()
//Check whether initiallization is needed
If (!DataFolderExists("root:Package_SLP:LoadLEEM" ))
SLP_LoadLEEM_init()
slp_Stitch_Init()
SLP_Util_Init()
Endif
wave /T SLP_ImgParamColDescrptn=root:Package_SLP:LoadLEEM:SLP_ImgParamColDescrptn
wave /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
wave SLP_ImgSetListSelW=root:Package_SLP:LoadLEEM:SLP_ImgSetListSelW
NVAR LoadLEEM_Sel=root:Package_SLP:LoadLEEM:LoadLEEM_Sel
NVAR LL_InitFlg=root:Package_SLP:LoadLEEM:LL_InitFlg
NVAR Dataset_Sel=root:Package_SLP:LoadLEEM:Dataset_Sel
DoWindow/K SLP_LL_01
NewPanel /W=(200,90,1000,610) /N=SLP_LL_01
//ShowTools/A
//SetDrawLayer UserBack
//DrawRect 38,43,330,266
Display /HOST=SLP_LL_01 /N=SLP_LL_01_ImPlot /W=(20,40,330,270)
ModifyGraph tick=3,noLabel=2
ModifyGraph width=0,height=0
ModifyGraph standoff=0
Button Button_DelDataSet,pos={650,10},size={130,20}, Fsize=10,title="Delete selected datasets",proc=ButtonProc_LL_DelDataSet
Button Button_FindScreenPos,pos={370,130},size={130,20}, Fsize=10,title="Find screen position..",proc=ButtonProc_LL_FindScreen
Button Button_SetScale,pos={370,155},size={130,20},Fsize=10,title="Set scale..", proc=ButtonProc_LL_SetScale
Button Button_Stitch,pos={370,180},size={130,20},Fsize=10,title="Stitch images..", proc=ButtonProc_LL_Stitch
Button Button_LoadFullSize,pos={370,215},size={130,20},Fsize=10,title="Load fullsize image", proc=ButtonProc_LL_LoadFullSize
Button Button_ExportSelImg,pos={370,240},size={130,20},Fsize=10,title="Export selected images..",proc=ButtonProc_LL_ExportSelImg
Button Button_CreateReport,pos={370,265},size={130,20},Fsize=10,title="Create report.."
Button Button_LoadImg,pos={20,280},size={115,20},Fsize=10,title="Load image set..", proc=ButtonProc_LL_LoadImg
Button Button_SelAll,pos={150,280},size={90,20},Fsize=10,title="Select all", proc=ButtonProc_LL_SelAll
Button Button_SelNone,pos={245,280},size={90,20},Fsize=10,title="Select none", proc=ButtonProc_LL_SelNone
Button Button_Done,pos={725,490},size={50,20},title="Done", proc=ButtonProc_LL_done
TitleBox SLP_LLP_TitleBox_Main,pos={330,10},size={210,20},title="LEEM/PEEM Image Browser"
TitleBox SLP_LLP_TitleBox_Main,fSize=16,frame=0
TitleBox SLP_LLP_TitleBox_Main1,pos={556,22},size={66,16},title="Dataset list"
TitleBox SLP_LLP_TitleBox_Main1,fSize=12,frame=0
TitleBox SLP_LLP_Titlebox_Descriptions, fsize=9, frame=0, pos={20,485},title="Double click wave name to display image in a separate window"
ListBox list0,pos={20,305},size={750,177}
ListBox list0,titleWave=SLP_ImgParamColDescrptn,mode= 2,selRow= 0
ListBox list0,widths={35,150,50,50,50,50,40,40,50,50,70,50,70,250,85,85}
ListBox list0,userColumnResize= 1
ListBox list0, proc=ListBoxProc_LL_ImgList
//ListBox list0, selWave=SLP_ImgParamListSelW
ListBox list1,pos={550,40},size={220,255}
ListBox list1,listWave=SLP_ImgSetListW
ListBox list1,mode= 2,selRow= 0
ListBox list1 widths={35,76,48,60}
ListBox list1,userColumnResize= 1
ListBox list1,titleWave=root:Package_SLP:LoadLEEM:SLP_DatasetColDescrptn
ListBox list1, proc=ListBoxProc_LL_DatasetList
ListBox list1, selrow=Dataset_Sel
ListBox list1, selWave=SLP_ImgSetListSelW
NVAR ce_X=root:Package_SLP:LoadLEEM:ce_X
NVAR ce_Y=root:Package_SLP:LoadLEEM:ce_Y
NVAR ce_SampleTemp=root:Package_SLP:LoadLEEM:ce_SampleTemp
SVAR ce_FOV1=root:Package_SLP:LoadLEEM:ce_FOV1
SVAR ce_Notes=root:Package_SLP:LoadLEEM:ce_Notes
SVAR ce_Date=root:Package_SLP:LoadLEEM:ce_Date
TitleBox SLP_LLP_TitleBox_02, pos={350,40},frame=0,title="Image parameters:"
Setvariable SetVar_X,pos={350,60},size={80,15},limits={-inf,inf,0},title="x:",value=ce_X,noedit=1
Setvariable SetVar_Y,pos={435,60},size={80,15},limits={-inf,inf,0},title="y:",value=ce_Y,noedit=1
Setvariable SetVar_SampleTemp,pos={350,80},size={80,15},limits={-inf,inf,0},title="Temp:",value=ce_SampleTemp,noedit=1
Setvariable SetVar_FOV1,pos={435,80},size={80,15},title="FOV:",value=ce_FOV1,noedit=1
Setvariable SetVar_Date,pos={350,100},size={180,15},title=" ",value=ce_Date,noedit=1,frame=0
Setvariable SetVar_notes,pos={20,15},size={300,15},title="Image notes:",value=ce_Notes,proc=SetVarProc_ImgNotes
//SetVariable setvar0,pos={387,149},size={50,19},fSize=12
//SetVariable setvar0,limits={-inf,inf,0},noedit= 1
//string DataSetName=SLP_ImgSetListW[LoadLEEM_Sel][1]
SVAR CurrentDataSet=root:Package_SLP:LoadLEEM:CurrentDataSet
If (LL_InitFlg==0)
string Pkg_Location="root:Package_SLP:LoadLEEM:"+CurrentDataSet
string ImgList_Fname=Pkg_Location+":SLP_ImgListW"
string ImgParam_Fname=Pkg_Location+":SLP_ImgParamListW"
string ImgParamSel_Fname=Pkg_Location+":SLP_ImgParamListSelW"
wave /T SLP_ImgListW=$ImgList_Fname
wave /T SLP_ImgParamListW=$ImgParam_Fname
wave SLP_ImgParamListSelW=$ImgParamSel_Fname
Wave /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
SLP_LL_PlotImage(SLP_ImgListW[LoadLEEM_sel][3],SLP_ImgListW[LoadLEEM_sel][2])
ListBox list0,listWave=SLP_ImgParamListW
ListBox list0, selWave=SLP_ImgParamListSelW
ListBox list0,selRow=LoadLEEM_sel
ListBox list0, selWave=SLP_ImgParamListSelW
Endif
End
Function SLP_Load_oldLEEM_Img()
//Load old .DAT file from Elmitec LEEM (before 2014)
//Positions (in bytes) for image size and image data (can be found from U-View manual)
variable ImWidth_Location=40
variable ImHeight_Location=42
variable ImageData_Location=392
variable ce_RefNum
String fileFilters = "Data Files (*.dat):.dat;"
Open /R /F=fileFilters ce_RefNum
String ce_FileName=S_fileName
ce_FileName=stringfromlist(itemsinlist(S_fileName,":")-1,S_fileName,":")
ce_FileName=stringfromlist(0,ce_FileName,".")
variable ce_ImWidth=0
variable ce_ImHeight=0
fsetpos ce_RefNum,ImWidth_Location
fbinread /F=2 ce_RefNum, ce_ImWidth
fsetpos ce_RefNum,ImHeight_Location
fbinread /F=2 ce_RefNum, ce_ImHeight
string ImgW_Name=ce_FileName
Prompt ImgW_Name, "Image wave name:"
DoPrompt "Enter",ImgW_Name
make /O /N=(ce_ImWidth,ce_ImHeight) $ImgW_Name /WAVE=ImgW
fsetpos ce_RefNum,ImageData_Location
fbinread /F=2 ce_RefNum,ImgW
Close ce_RefNum
NewImage ImgW
End
Function SLP_LL_DataSetSelect(DataSet_Row)
variable DataSet_Row
string SelectedDataSetName
//Plot the new image and select the new dataset
//NVAR N_Datasets=root:Package_SLP:LoadLEEM:N_Datasets
SVAR CurrentDataset=root:Package_SLP:LoadLEEM:CurrentDataset
NVAR LoadLEEM_Sel=root:Package_SLP:LoadLEEM:LoadLEEM_Sel
NVAR DataSet_Sel=root:Package_SLP:LoadLEEM:DataSet_Sel
wave /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
string DataSetName=SLP_ImgSetListW[DataSet_Row][1]
string Pkg_Location="root:Package_SLP:LoadLEEM:"+DataSetName
string ImgList_Fname=Pkg_Location+":SLP_ImgListW"
string ImgParam_Fname=Pkg_Location+":SLP_ImgParamListW"
string ImgParamSel_Fname=Pkg_Location+":SLP_ImgParamListSelW"
wave /T SLP_ImgListW=$ImgList_Fname
wave /T SLP_ImgParamListW=$ImgParam_Fname
wave SLP_ImgParamListSelW=$ImgParamSel_Fname
string LLSel_Recall_Fname=Pkg_Location+":LoadLEEM_Sel_Recall"
NVAR LoadLEEM_Sel_Recall=$LLSel_Recall_Fname
//Make selection for List0 (Image list)
ListBox list0,listwave= SLP_ImgParamListW,selRow=LoadLEEM_Sel_Recall,Row=LoadLEEM_Sel_Recall,selWave=SLP_ImgParamListSelW
LoadLEEM_Sel=LoadLEEM_Sel_Recall
//Make selection for List1 (Dataset list)
ListBox list1,selRow=DataSet_Row
CurrentDataset=SLP_ImgSetListW[DataSet_Row][1]
Dataset_Sel=DataSet_Row
//Plot the image (the first one in the new dataset)
SLP_LL_PlotImage(SLP_ImgListW[LoadLEEM_Sel_Recall][3],SLP_ImgListW[LoadLEEM_Sel_Recall][2])
End
Function ButtonProc_LL_DelDataSet(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
// click code here
DoAlert 1,"Delete selected dataset(s)?"
if (V_flag==1)
NVAR Dataset_Sel=root:Package_SLP:LoadLEEM:Dataset_Sel
wave SLP_ImgSetListSelW=root:Package_SLP:LoadLEEM:SLP_ImgSetListSelW
//Change dataset selection if the current one is going to be delected
if (SLP_ImgSetListSelW[Dataset_Sel][0]==48)
//Find the first non-selected DataSet from the top
variable i=0
For (i=0;i<dimsize(SLP_ImgSetListSelW,0)&&SLP_ImgSetListSelW[i][0]==48;i+=1)
DoUpdate
Endfor
//i is now the index of the first non-selected DataSet
If (i<dimsize(SLP_ImgSetListSelW,0))
SLP_LL_DataSetSelect(i)
Else //All datasets have been selected
SLP_LoadLEEM_Init()
Endif
Endif
SLP_LL_DelDataSetBatch()
endif
break
case -1: // control being killed
break
endswitch
return 0
End
Function SLP_LL_DelDataSetBatch()
//Modified 20170226 by CE
WAVE /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
WAVE SLP_ImgSetListSelW=root:Package_SLP:LoadLEEM:SLP_ImgSetListSelW
variable i=0
string DataSetName=""
string DeleteList=""
variable Del_error=0
string Error_txt=""
For (i=0;i<dimsize(SLP_ImgSetListW,0)&&Del_error==0;i+=1)
if (SLP_ImgSetListSelW[i][0]==48) //If the check box is checked
//Deleting the dataset [CODE:SLP_LL_DelDataSet]
DataSetName=SLP_ImgSetListW[i][1]
Del_error=SLP_LL_DelDataSet(DataSetName)
i-=1 //Go back one row
//Add the index of the dataset to be deleted in the DataSet list
If (Del_error!=0) //If imageset folder cannot be deleted, generate an error message
Error_txt="Error deleting dataset: "+DataSetName+"\r Images in the dataset are being used somewhere in the current project"
DoAlert 0,Error_txt
EndIf
Endif
Endfor
End
Function SLP_LL_DelDataSet(DataSetName)
string DataSetName
// - DataSet name as the input parameter and not the row position
// - Delete data folder, and modify the ListW in Pkg folder
// - The function returen Error_Flg
//Modified 20170226 by CE
WAVE /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
WAVE SLP_ImgSetListSelW=root:Package_SLP:LoadLEEM:SLP_ImgSetListSelW
NVAR N_datasets=root:Package_SLP:LoadLEEM:N_datasets
FindValue /TEXT=DataSetName /TXOP=6 SLP_ImgSetListW
variable col=floor(V_value/dimsize(SLP_ImgSetListW,0))
variable row=V_value-col*dimsize(SLP_ImgSetListW,0)
string Pkg_Location="root:Package_SLP:LoadLEEM:"+DataSetName
string ImgList_Fname=Pkg_Location+":SLP_ImgListW"
wave /T ImgListW=$ImgList_Fname
string Img_Location=ImgListW[0][2]
killDataFolder /Z $Img_Location
variable DeleteImgError_Flg=V_Flag
if (DeleteImgError_Flg==0)
//Only delete package folder if Image folder can be deleted
killDataFolder /Z $Pkg_Location
//Remove the row from SLP_ImgSetListW
DeletePoints row,1, SLP_ImgSetListW
DeletePoints row,1, SLP_ImgSetListSelW
//Update the number of DataSets
N_datasets-=1
Endif
Return DeleteImgError_Flg
End
Function ButtonProc_LL_SetScale(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
// click code here
Create_SetScale_Panel()
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProc_LL_LoadFullSize(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
// click code here
SLP_LoadFullSize()
break
case -1: // control being killed
break
endswitch
return 0
End
Function ListBoxProc_LL_ImgList(lba) : ListBoxControl
STRUCT WMListboxAction &lba
Variable row = lba.row
Variable col = lba.col
WAVE/T/Z listWave = lba.listWave
WAVE/Z selWave = lba.selWave
SVAR CurrentDataSet=root:Package_SLP:LoadLEEM:CurrentDataSet
NVAR LoadLEEM_Sel=root:Package_SLP:LoadLEEM:LoadLEEM_Sel
string LoadLEEM_Sel_Recall_FName="root:Package_SLP:LoadLEEM:"+CurrentDataSet+":LoadLEEM_Sel_Recall"
NVAR LoadLEEM_Sel_Recall=$LoadLEEM_Sel_Recall_FName
string Pkg_Location="root:Package_SLP:LoadLEEM:"+CurrentDataSet
string ImgList_Fname=Pkg_Location+":SLP_ImgListW"
string ImgParam_Fname=Pkg_Location+":SLP_ImgParamListW"
wave /T SLP_ImgListW=$ImgList_Fname
wave /T SLP_ImgParamListW=$ImgParam_Fname
wave /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
if (row>=0&&row<dimsize(SLP_ImgParamListW,0))
String ImageName=SLP_ImgListW[row][3]
String ImageLocation=SLP_ImgListW[row][2]
//string Full_ImageName=ImageLocation+":"+ImageName
switch( lba.eventCode )
case -1: // control being killed
break
case 4: // mouse down
LoadLEEM_Sel=row
LoadLEEM_Sel_Recall=row
SLP_LL_PlotImage(ImageName,ImageLocation)
break
case 3: // double click
LoadLEEM_Sel=row
LoadLEEM_Sel_Recall=row
SLP_LL_PlotImage(ImageName,ImageLocation)
SLP_LL_PlotSingleImg()
break
//case 4: // cell selection
case 5: // cell selection plus shift key
break
case 6: // begin edit
break
case 7: // finish edit
break
case 13: // checkbox clicked (Igor 6.2 or later)
break
endswitch
Else
ListBox List0, SelRow=LoadLEEM_Sel
endif
return 0
End
Function ButtonProc_LL_ExportSelImg(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
// click code here
SLP_LL_ExportSelImg()
break
case -1: // control being killed
break
endswitch
return 0
End
Function SLP_LL_ExportSelImg()
SVAR CurrentDataSet=root:Package_SLP:LoadLEEM:CurrentDataSet
string Pkg_Location="root:Package_SLP:LoadLEEM:"+CurrentDataSet
string ImgList_Fname=Pkg_Location+":SLP_ImgListW"
string ImgParam_Fname=Pkg_Location+":SLP_ImgParamListW"
string ImgParamSel_Fname=Pkg_Location+":SLP_ImgParamListSelW"
wave /T SLP_ImgListW=$ImgList_Fname
wave /T SLP_ImgParamListW=$ImgParam_Fname
wave /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
wave SLP_ImgParamListSelW=$ImgParamSel_Fname
wave SLP_ImgSetListSelW=root:Package_SLP:LoadLEEM:SLP_ImgSetListSelW
//Choose folder to save image files
GetFileFolderInfo /D/Q
NewPath /O/Q PathName, S_Path //Create SYMBOLIC path (cannot use normal text for path!)
//Prepare textwave to convert to .csv file
make /T/O /N=(1,dimsize(SLP_ImgParamListW,1)) SLP_ImgParamExpW
wave SLP_ImgParamColDescrptn=root:Package_SLP:LoadLEEM:SLP_ImgParamColDescrptn
duplicate /T/O SLP_ImgParamColDescrptn, SLP_ImgParamColDescrptn_tmp
redimension /N=(1,dimsize(SLP_ImgParamColDescrptn,0)) SLP_ImgParamColDescrptn_tmp
SLP_ImgParamExpW[0][]=SLP_ImgParamColDescrptn_tmp[0][q]
killwaves SLP_ImgParamColDescrptn_tmp
//Load selected images
variable i=0
variable j=1
string FileName=""
string ImgFName=""
For (i=0;i<dimsize(SLP_ImgListW,0);i+=1)
if (SLP_ImgParamListSelW[i][0]==48)
ImgFName=SLP_ImgListW[i][2]+SLP_ImgListW[i][3]
wave ImgW=$ImgFName
FileName=SLP_ImgListW[i][3]+".TIFF"
//Filename="test"+num2str(i)
ImageSave /IGOR /T="tiff" /P=PathName ImgW as FileName //(cannot use normal text for path!)
redimension /N=(dimsize(SLP_ImgParamExpW,0)+1,dimsize(SLP_ImgParamExpW,1)) SLP_ImgParamExpW
SLP_ImgParamExpW[j][]=SLP_ImgParamListW[i][q]
j+=1
Endif
Endfor
//Create .csv file w/ image details
//edit SLP_ImgParamExpW
string out_name="Parameter_List_"+CurrentDataSet+".csv"
Save/G /O /M="\n" /P=PathName SLP_ImgParamExpW as out_name
killwaves SLP_ImgParamExpW
End
Function SLP_LL_PlotSingleImg()
SVAR CurrentDataSet=root:Package_SLP:LoadLEEM:CurrentDataSet
string Pkg_Location="root:Package_SLP:LoadLEEM:"+CurrentDataSet
string ImgList_Fname=Pkg_Location+":SLP_ImgListW"
string ImgParam_Fname=Pkg_Location+":SLP_ImgParamListW"
wave /T SLP_ImgListW=$ImgList_Fname
wave /T SLP_ImgParamListW=$ImgParam_Fname
wave /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
wave SLP_ImgSetListSelW=root:Package_SLP:LoadLEEM:SLP_ImgSetListSelW
NVAR LoadLEEM_Sel=root:Package_SLP:LoadLEEM:LoadLEEM_Sel
NVAR Dataset_Sel=root:Package_SLP:LoadLEEM:Dataset_Sel
String ImgW_FName=SLP_ImgListW[LoadLEEM_Sel][2]+SLP_ImgListW[LoadLEEM_Sel][3]
wave ImgW=$ImgW_FName
String ImgLabel_L1="Image wave name: "+SLP_ImgListW[LoadLEEM_Sel][3]
String ImgLabel_L2="(x,y): ("+SLP_ImgParamListW[LoadLEEM_Sel][2]+"mm ,"+SLP_ImgParamListW[LoadLEEM_Sel][3]+"mm), FOV: "+SLP_ImgParamListW[LoadLEEM_Sel][5]
String ImgLabel_L3="Temperature: "+SLP_ImgParamListW[LoadLEEM_Sel][4]+ "。"
NewImage ImgW
//ModifyGraph margin(bottom)=60
Legend /A=RB "\Z08"+ImgLabel_L1+"\r"+ImgLabel_L2+"\r"+ImgLabel_L3
End
Function ListBoxProc_LL_DatasetList(lba) : ListBoxControl
STRUCT WMListboxAction &lba
Variable row = lba.row
Variable col = lba.col
WAVE/T/Z listWave = lba.listWave
WAVE/Z selWave = lba.selWave
SVAR CurrentDataSet=root:Package_SLP:LoadLEEM:CurrentDataSet
NVAR Dataset_sel=root:Package_SLP:LoadLEEM:Dataset_sel
wave /T SLP_ImgSetListW=root:Package_SLP:LoadLEEM:SLP_ImgSetListW
string Sel_Recall_Name="root:Package_SLP:LoadLEEM:"+CurrentDataSet+":LoadLEEM_Sel_Recall"
NVAR LoadLEEM_Sel_Recall=$Sel_Recall_Name
NVAR LoadLEEM_Sel=root:Package_SLP:LoadLEEM:LoadLEEM_Sel
LoadLEEM_Sel_Recall=LoadLEEM_Sel
if (row!=-1&&row<dimsize(SLP_ImgSetListW,0)) //Prevent users from clicking outside the SLP_ImgSetListW's range
switch( lba.eventCode )
case -1: // control being killed
break
case 4: // mouse down
CurrentDataSet=SLP_ImgSetListW[row][1]
Dataset_Sel=row
string ImageParamListW_FName="root:Package_SLP:LoadLEEM:"+CurrentDataSet+":SLP_ImgParamListW"
string ImageListW_FName="root:Package_SLP:LoadLEEM:"+CurrentDataSet+":SLP_ImgListW"
Sel_Recall_Name="root:Package_SLP:LoadLEEM:"+CurrentDataSet+":LoadLEEM_Sel_Recall"
NVAR LoadLEEM_Sel_Recall=$Sel_Recall_Name
LoadLEEM_Sel=LoadLEEM_Sel_Recall
wave /T SLP_ImgParamListW=$ImageParamListW_FName
wave /T SLP_ImgListW=$ImageListW_FName
ListBox list0,listWave=SLP_ImgParamListW,selRow=LoadLEEM_Sel,Row=LoadLEEM_Sel
string Pkg_Location="root:Package_SLP:LoadLEEM:"+CurrentDataSet
string ImgParamSel_Fname=Pkg_Location+":SLP_ImgParamListSelW"
wave SLP_ImgParamListSelW=$ImgParamSel_Fname
ListBox list0, selWave=SLP_ImgParamListSelW
SLP_LL_PlotImage(SLP_ImgListW[LoadLEEM_Sel][3],SLP_ImgListW[LoadLEEM_Sel][2])
break
case 3: // double click
break
//case 4: // cell selection
case 5: // cell selection plus shift key
break
case 6: // begin edit
break
case 7: // finish edit
break
case 13: // checkbox clicked (Igor 6.2 or later)
break
endswitch
else
Listbox List1, SelRow=Dataset_Sel
endif
return 0
End
Function SLP_LL_PlotImage(ImageName,ImageLocation)
string ImageName
string ImageLocation
SVAR CurrentImageName=root:Package_SLP:LoadLEEM:CurrentImageName
SVAR LL_ImgColour=root:Package_SLP:LoadLEEM:LL_ImgColour
//SVAR Image_Location=root:Package_SLP:LoadLEEM:LoadLEEM_ImgLoc
//Check whether the plot is blank
variable N_images=itemsinlist(ImageNameList("SLP_LL_01#SLP_LL_01_ImPlot",";"))
string FullImageName=ImageLocation+ImageName
string PlotName="SLP_LL_01#SLP_LL_01_ImPlot"
If (N_images!=0) //If the image plot is not empty
if (!stringmatch(ImageName,CurrentImageName)) //If the same image is already there - don't do anything
//Accquire the colour setting of the previous image
string prev_ImgInfo=imageinfo(PlotName,CurrentImageName,0)
string prev_ImgColour=stringfromlist(1,greplist(prev_ImgInfo,"RECREATION",0,";"),":")
prev_ImgColour=RemoveEnding(prev_ImgColour) //Remove ';' at the end
LL_ImgColour=prev_ImgColour //Save the image colour settings
Appendimage /W=$PlotName $FullImageName;delayupdate
Execute "ModifyImage /W="+PlotName+" "+ImageName +" "+ prev_ImgColour + ";Delayupdate"//Need to use Execute command
//ModifyImage /W=$PlotName $ImageName ctab= {45,90,Terrain,0};delayupdate
removeimage /W=$PlotName $CurrentImageName //Remove previous image
Endif
Else
Appendimage /W=$PlotName $FullImageName;delayupdate
Execute "ModifyImage /W="+PlotName+" "+ImageName +" "+ LL_ImgColour + ";Delayupdate"//Need to use Execute command
//ModifyImage /W=$PlotName $ImageName ctab= {45,90,Terrain,0};delayupdate
Endif
ModifyGraph /W=$PlotName standoff=0
ModifyGraph /W=$PlotName fSize=7
SetAxis /W=$PlotName/A/R left
ModifyGraph /W=$PlotName minor=1
CurrentImageName=ImageName
//Display the important parameters
NVAR LoadLEEM_sel=root:Package_SLP:LoadLEEM:LoadLEEM_sel
SVAR CurrentDataSet=root:Package_SLP:LoadLEEM:CurrentDataSet
string SLP_ImgParamListW_FName="root:Package_SLP:LoadLEEM:"+CurrentDataSet+":SLP_ImgParamListW"
Wave /T SLP_ImgParamListW=$SLP_ImgParamListW_FName
NVAR ce_X=root:Package_SLP:LoadLEEM:ce_X
NVAR ce_Y=root:Package_SLP:LoadLEEM:ce_Y
NVAR ce_SampleTemp=root:Package_SLP:LoadLEEM:ce_SampleTemp
SVAR ce_FOV1=root:Package_SLP:LoadLEEM:ce_FOV1
SVAR ce_notes=root:Package_SLP:LoadLEEM:ce_notes
SVAR ce_Date=root:Package_SLP:LoadLEEM:ce_Date
ce_X=str2num(SLP_ImgParamListW[LoadLEEM_sel][2])
ce_Y=str2num(SLP_ImgParamListW[LoadLEEM_sel][3])
ce_SampleTemp=str2num(SLP_ImgParamListW[LoadLEEM_sel][4])
ce_FOV1=SLP_ImgParamListW[LoadLEEM_sel][5]
ce_Notes=SLP_ImgParamListW[LoadLEEM_sel][13]