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SLPA_ce20180315b.ipf
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SLPA_ce20180315b.ipf
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#pragma rtGlobals=3 // Use modern global access method and strict wave access.
/////////////////////////////////////
//////////CHANGE LOG/////////////////
////////////////////////////////////
//SLPA ver. ce20180222a.ipf
// - [UTIL] Bug fix: SLP_Util_ShirleyGen to be able to create Shirley BG for both positive and negative dE.
//SLPA ver. ce20180221a.ipf
// - [DXPS] SLP_DXPS_Convert4PCA() - convert Map Volume Wave into a table to be used for PCA analysis software
//SLPA ver. ce20180219a.ipf
// - [UTIL] SLP_Util_Split2D() to split 2D wave (e.g. TRXPS scan) into multiple 1D waves
// - [UTIL] SLP_Util_NormalizeMultiWaves()
//SLPA ver. ce20180212a.ipf
// - [UTIL] add SLP_Util_ShirleyGen to generate Shirley BG and subtract the BG (for XPS)
//SLPA ver. ce20180201a.ipf
// - [DXPS] Ask users for photon energy (hv) when loading the scan.
//SLPA ver. ce20180131b.ipf
// - [DXPS] Bug fixes on the BE/STV swap for Merged spectrum after changing Disp. Factor or (x0,y0)
// - [DXPS] Change default values
//SLPA ver. ce20180131a.ipf
// - [DXPS] Bug fixes on the overwriting exported waves.
//SLPA ver. ce20180130b.ipf
// - [DXPS] Initialize the selected dispersive line (vertical line in the middle)
//SLPA ver. ce20180130a.ipf
// - [DXPS] Ask whether user wants to overwrite the wave when exporting the plot
//SLPA ver. ce20180116a.ipf
// - [DXPS] Check whether the selected scan name is duplicated or not.
//SLPA ver. ce20171227a.ipf
// - [DXPS] Bug fix - Newly loaded scan is selected after the load finish.
//SLPA ver. ce20171030a.ipf
// - [DXPS] Bug fix - add the auto detection of STV start, STV step from .txt file in the DXPS scan.
//SLPA ver. ce20170920a.ipf
// - [IXPS] Bug fix - Extract LEEM Cutoff - previously MapVol size is only 1 layer and only collect the first parameter. Corrected now.
//SLPA ver. ce20170906d.ipf
// - [LL] Note field is now editable. Can make note for individual image
//SLPA ver. ce20170906c.ipf
// - [Util] Ask user to find SLP_Auger_W.ibw or SLP_BE_W.ibw if they have not been loaded to the current Igor folder.
//SLPA ver. ce20170906b.ipf
// - [DXPS] Add Auger data to peak assignment
// - [IXPS] Add Auger data to peak assignment
//SLPA ver. ce20170906a.ipf
// - [LL] Bug fix - Display preview image once the 'Preview' checkbox is clicked [ListBoxProx_LL_FileList]
//SLPA ver. ce20170904a.ipf
// - [DXPS] Bug fix - Peak assignment hook function.
//SLPA ver. ce20170816b.ipf
// - [IXPS] Draw ROI manually instead of using auto- screen mask creation
//SLPA ver. ce20170816a.ipf
// - [DXPS] SLP_DXPS_RestoreRawData - If the raw data has been moved, ask user to browse for it.
//SLPA ver. ce20170815b.ipf
// - [DXPS] Peak assignment function.
//SLPA ver. ce20170815a.ipf
// - [DXPS] BE/KE display for the combined spectrum. Export to BE or KE. Prompt for analyzer's WF if no input.
//SLPA ver. ce20170728a.ipf
// - [IXPS] Fix small bugs on peak assignment/BE display function (initialize new scans)
// - [IXPS] Warn when users try to use existing volume names (incl. names used by other SLP functions) during Load Scan..
//SLPA ver. ce20170713a.ipf
// - [IXPS] Peak assignment (using BE table)
//SLPA ver. ce20170707c.ipf
// - [IXPS] Export and plot z-profile (both KE and BE)
//SLPA ver. ce20170707a.ipf
// - [IXPS] Save z-profile cursor positions for each scan
// - [IXPS] Able to switch KE<->BE scale
//SLPA ver. ce20170707a.ipf
// - [IXPS] Bug fix - Delete all scans = ok (previously didn't actually delete raw data..)
//SLPA ver. ce20170706c.ipf
// - [IXPS] Automatically detect STV start, STV step when loading IXPS,DXPS,LEEDIV,LEEMIV
//SLPA ver. ce20170706b.ipf
// - [DLA] Bug fix - Don't display anything if there is no image loaded yet
// - [UTIL] LoadMultImg2Vol can now load either .tif and .TIFF for
// - [IXPS] Bug fix - Error when 'See z-profile' is checked when loading new volume.
//SLPA ver. ce20170706a.ipf
// - [DLA] Include Diffusion Limit Aggregation analysis (SLP_DLA_ce20170504d.ipf)
//SLPA ver. ce20170629a.ipf
// - [IXPS] Can use cursor to see different z-profile in different area. First use of 'hook' function in Igor.
//SLPA ver. ce20170627a.ipf
// - [IXPS] Add 'LEEM cut-off' mapping (for rel. WF measurement with LEEM).
//SLPA ver. ce20170607a.ipf
// - [IXPS] Can now adjust Isochromaticity mathematical function (displayed in SetVar controls)
//SLPA ver. ce20170606d.ipf
// - [IXPS] Use Inversed GLA instead (for KE scale)
//SLPA ver. ce20170606c.ipf
// - [IXPS] Add 4GLAs fit function
// - [IXPS] Small bug fix on display selected param. map (applied auto-intensity)
//SLPA ver. ce20170606b.ipf
// - [IXPS] Add 3GLAs fit function
//SLPA ver. ce20170606a.ipf
// - [IXPS] adjust LLim and ULim after loading
// - [IXPS] Bug fixes for the Display/selected image vs. histogram and auto intensity adjust
//SLPA ver. ce20170430b.ipf
// - [IXPS] Change to green color
//SLPA ver. ce20170430a.ipf
// - [IXPS] Copy fit coef. from another scan
//SLPA ver. ce20170429b.ipf
// - [IXPS] Update fit mask LLim and ULim variable with scan selection
// - [IXPS] Copy screen mask from another scan (with the same bin)
//SLPA ver. ce20170429a.ipf
// - [IXPS] 1GLA fit mode added
// - [IXPS] Hold functionality for keeping fit coef. constant
//SLPA ver. ce20170424a.ipf
// - [IXPS] Improve the auto range funtionality - use median then average MatrixFilter (avg works quite well with NaN)
//SLPA ver. ce20170424a.ipf
// - [IXPS]
// - Correc the Image selection function - should work properly now
// - Do a 'low pass filter' with MatrixFilter in the 'median' mode to remove speckles. The histogram looks much better this way.
// - Automatically set the Color min/max using the LPF'ed Map
// - Update the color min/max slider and color min/max update the ParamDisplayW
// - Clean up the DisplaySel function (call the SelectImage function instead of doing it by itself)
//SLPA ver. ce20170420a.ipf
// - [NEX] Load scans.. button is now load only one scan at a time. It also checks and corrects the scan name automatically.
// - [IXPS] Auto create correction (using 2d parabolic correction function)
//SLPA
// - Load_LEEMDAT_ce20170226a.ipf
// - SLP_NEXAFS_ce20170104a.ipf
// - DispXPS_Panel_ce20170302f.ipf
// - ImgXPS_Panel_ce20170321e.ipf
// - SLP_Util_ce20170226a.ipf
//ver. ce20170104a
// - Add SLP_Load_oldLEEM_Img() - Load old .DAT file from Elmitec LEEM (before 2014)
//ver. ce20161216a
// - Add image creation date/time in the param list
//ver. ce20161215c
// - Add Image notes
// - Some cosmetic changes
// - Bug fix on deleting many DataSet
//ver. ce20161215b
// - Delete dataset is available. It warns when some images are in used. Dataset won't be deleted in that case.
//ver. ce20161214a
// - Cross-hair in the Find screen dialog (only if the x-y scale is not set). Values of new x_center and y_center can be manually changed.
// - Change Plot single image button to Plot fullsize image (required that the data file is accessible). Plot single image still works with double clicking the image name in the list
//ver. ce20161210a
// - Stitch - ROI can be modified. Mask creation window also shows selected image behind the mask.
//ver. ce20161209a
// - Add functions to scale images, find screen position, and image stitching
// - Plot the displayed image w/ description legend
// - Export selected images to TIFF files in selected folder w/ a .csv file containing image details
//[from Stitch .ipf Ver. ce20161128a.ipf
// - Work with LoadLEEM .ipf
// - Set scale for selected images in the dataset. Scale can be pixel, relative or absolute (offset with Mitutoyo X,Y reading).
//Ver. ce20161207a.ipf
// - Stitching almost works. Need algorithm for some FOV adjustment (e.g. 75um FOV is not really
//ver. ce20161119a
// - Load images (.DAT) in batch. Read and store important LEEM/PEEM parameters from the header of the image file
//ver.ce20161123a
// - User interface
// - Load sets of image and automatically save the image set.
//ver.ce20161124a
// - Bug fixed - solve the problem when the some image number is missing. Change the search algorithm in the SLP_LL_setup function (now ver.2)
// - Record no. of images in the 4th column of DatasetListW
// - Cosmetic change to the image plot display
//ver. ce20161126a
// - New dataset selection and display automatically after loading
// - Default resize option is 0.25 and is kept afterward
// - Bug fixed - parameter display update
// - Dataset name suggestion using folder name
//ver. ce20161127a
// - Warn when users use duplicated dataset name
//ver. ce20161127b
// - Remove the 128 dataset limit. ImgSetListW size is increased with added datasets
// - use 'row=" in the ListBox selection so that the selection is always visible when switching between datasets
// - Prevent users from clicking outside the range in Image and DataSet listboxes
//ver. ce20161127c
// - Image/dataset selection with SelWave
// - Select all/select none buttons for image list
//ver. ce20161127d
// - Image ctab (colour/first colour/last colour)is retained for the next image selection. It is saved for the next time the program is run
//ver. ce20170226a
// - Add new image load panel. The multiple image loading is easier and more efficient.
// - Bug fix on the deleting datasets (the previous version doesn't use /TXOP=6 in the FindValue so the deletion had been wrong
/////////////////////////////////////
/////////////TODOs/////////////////
/////////////////////////////////////
// [LEED-IV]
// - Extract IV curves from LEEM's LEED
// [UTIL]
// - Project creation
// - Auto detect/index new data
// - Auto update??
// - Report creation assist - Report panel
// [LoadLEEM]
// + Functionality
// - ***Make notes for individual images [to be used for Report Making feature]
// - **Report making
// - Record time when images have been captured
// + Bug fixes
// - Editable note column for images and dataset
// - Load TIFF&other file types as well
// - Should be able to distinguish the LEED/Disp. mode and prevent program from interrupting the processes
// - Error when all datasets are deleted
// - FOV name table <-> FOV variable
// [NEXAFS]
// - Option to load existing wave instead of from .txt file (e.g. z-profile waves extracted from [ImgXPS]
// - Fit and Global fit
// - Report creation - export to LaTeX
// - Rescale selected graph button
// - Clear all graph selections button
// - Memorise recipe parameter values
// [ImgXPS]
// - Volume data pre-processing - [z-wave] Normalize, subtraction, and [xy wave] Isochromaticity correction, brightness correction before extraction
// + Additional features *
// - Th. adj. for screen mask creation
// - Error report when scrn. msk. creation is not successful
// - Coef. real-time display for curve fitting
// - Est. time for extraction
// - Quick ext. mode (no fit display)
// - Error marking for bad fit.
// [DispXPS]
// - Fitting and Global Fitting
// - Use 'absolute' scale (in ref. to the MCP screen size).
// - Default parameters
// Bug fixes
// - Axis label disappears for both indv. and cmbn. plots
// - Disp. and P. lines display is not correct sometimes.
// [DLA]
// - Bug fixes - duplicate Voronoi cell
// - Manually movable/editable/addable island centers
/////////////////////////////////////
/////////////ARCHIVE/////////////////
/////////////////////////////////////
//CODE: DispXPSPanel
//Ver. ce20170301a
// - First working version
// - Data loaded and saved in separated folders (Raw data in one folder)
// - Adjust threshold and minimum disp. size (in pixels) to find a dispersive line automatically
// - Extract XPS spectra from different position in the disp. line (several param. can be selected in the panel)
// - Disp. factor and energy position can be calibrated in the panel
//Ver. ce20170301b
// - Can now choose Disp. line and subsequent P. lines gen. param. from another scan (helps when measuring low S/N scans, or Ef)
// - Can correct the first frame which sometimes has unusually high intensity (by copying the second frame onto it - losing 1 data point).
//Ver. ce20170301c
// - Can remove the raw data to reduce the project file size.
// - Small code clean-up
//Ver. ce20170301d
// - Can restore raw data for re-processing
//Ver. ce20170302a
// - Small bug fixes (control toggling when scan has/has no raw data
// - Select all/select none buttons
//Ver. ce20170302b
// - Export and plot results (combined spectrum only)
//Ver. ce20170302c
// - Add Scan Note (all the parameters used in the data extraction) to the exported wave
//Ver. ce20170302d
// - Bug fixed: Error when trying to adjust Disp. Factor/x0/y0 w/o raw data (removed a wave refrence to the raw data)
// - Bug fixed: Copy dispersive line from.. button -> Error conditioning with V_Flag (Continue -> V_Flag=0)
// - Bug fixed: NLines is not stored in the ScanListW! -> Fixed
// - Check ScanName and make suggestions for users to conform to Standard Wave Name. [CODE: SLP_Util_WNameCheck], [CODE: SLP_Util_WNameSuggest]
//Ver. ce20170302e
// - Manual edit of the disp. line
//Ver. ce20170302f
// - Cosmetic change - panel colour = blue
//[POS]IXPS Begin
//CODE: ImgXPSPanel
//
// Ver.ce20170310c
// - Almost working - Ver. 0.7
// - Can Load and display image volume w/ slider
// - Automatic screen mask creation
// - Loop data fitting for (binned) each pixel
// - Extraction progress (in %)
// - Load correction waves from DataBrowser window
// - Correction fine-adjustment (x,y,magnitude)
// Ver.ce20170311a
// - ListBoxProc for DisplayListW
// - ListBoxProc for XPS param ListW
// Ver.ce20170311b
// - Auto color scale/int. for the image volume/maps
// - Some fix on using the ScanList ListBox
// - properly show ImgVol or IntgImg depending on whether there is raw data stored in the project
// Ver.ce20170311d
// - Can now use slider to adjust color scale
// - Radio button to select which Image to adjust the color scale
// - Use STRUCT of the checkbox control.
// Ver.ce20170312a
// - Export/display maps
// - Still with some bugs
// - Can still extract only the cutoff (w/ ERF fit) for WF measurements
// Ver. ce20170312b
// - First working version - Ver. 1.0
// - Many bug fixes..
// Ver. ce20170317a
// - Small bug fix (automatically select newly loaded Scans, display fitted curve)
// Ver. ce20170321b
// - Can now select which fitting mode to use (2 modes - Secondary Yield Cut-off for WF measurements, and 2GLAs for isochromaticity map)
// - 'Fast Extraction' mode (much faster with /N=1 in FuncFit)
// Ver. ce20170321c
// - Adjust Threshold for finding screen
// Ver. ce20170321d
// - Clean up the windows. Move graph and control positions.
// Ver. ce20170321e
// - Init check. Bug fixes (not 100% yet)
//Igor procedure to assist BL3.2Ub operation and data analyses
//ver. ce20161031a
// - Can load, draw line, change line profile width, and plot profile and intensity vs. time plot
// - Still very buggy
//ver. ce20161107b
// - Initialize program (creating Package waves, global variables, etc.)
// - Plotting the result
// - Label and formatting graph
// - Stored and display previous image series
// - Updating line profiles with line profile width
// - Remove old line profile (bottom graph)
//ver. ce20161111a
// - Keep raw images and line profiles in separated folders
//ver. ce20170226a
// - Change name to SLP_XPS
// - Merge SLP_WF_ce20170208a.ipf (WF mapping)
// - Merge SLP_CreateDispLines_ce20170214a.ipf (Automatic dispersion line finding and multiple-point data collection for XPS)
//Current ver. ce20161114a
// Todos
// - New DataSet system (from SLP_LoadLEEM)
// - Filter for file loading (e.g. *.TIF)
// - Option to load .DAT and extract data
// - Auto calculation of dispersion (eV/pixel)
// - Show line profile width
// - Delete raw data (to save disk space)
// - Clean up the code
///////////////////////////
//Under developments///////
//SLPA Multi GLAs anaysis///
///////////////////////////
//TODOs
// - Line size adjust
// - Arbitrary constraints
// - Display 'Kn' for each parameter
// - Log file and history
//Bug fixes
// - Error to add peak to library if the library is empty..
// - Attenuation function for Erf and atan
// - Kn disappears when press 'Default'
//Function
// - Slider
// - BG subtraction
// - Peak select
// - Copy Guess values
// - Default constraint
// - use default constraint and edit
// - Peak library and import peak library from a .txt file
// - Colour changes /w hold or guess out of range
// - Save/Load guesses
// - Fit and show fit results
// - Display last fit result
// - BG adjust and record
// - Export fit results
// - Check for duplicated new data W name
// - Allow user to change data W name
// - Peak area report
// - Fine steps for guess coef. adjustment
//Bug fixed
// - Users can now click cancel for the load new data
//USE OFTEN
Function SLP_MGFit_UseOften()
ControlInfo /W=SLP_MultiGLAFit_01 ListBox_DataList
Variable DataRow=V_Value
ControlInfo /W=SLP_MultiGLAFit_01 ListBox_PeakParam
Variable PeakRow=V_Value
Wave /T SLP_MGFit_DataListW=root:Package_SLP:MGFit:SLP_MGFit_DataListW
Wave SLP_MGFit_DataListSelW=root:Package_SLP:MGFit:SLP_MGFit_DataListSelW
Wave /T SLP_MGFit_ConstraintDisplayW=root:Package_SLP:MGFit:SLP_MGFit_ConstraintDisplayW
Wave SLP_MGFit_ConstraintDisplaySelW=root:Package_SLP:MGFit:SLP_MGFit_ConstraintDisplaySelW
Wave /T SLP_MGFit_DefaultConstraintW=root:Package_SLP:MGFit:SLP_MGFit_DefaultConstraintW
Wave SLP_MGFit_DefaultConstraintSelW=root:Package_SLP:MGFit:SLP_MGFit_DefaultConstraintSelW
Wave /T SLP_MGFit_PeakLibraryW=root:Package_SLP:MGFit:SLP_MGFit_PeakLibraryW
Wave SLP_MGFit_PeakLibrarySelW=root:Package_SLP:MGFit:SLP_MGFit_PeakLibrarySelW
String DataName=SLP_MGFit_DataListW[DataRow][0]
String DataLocation=SLP_MGFit_DataListW[DataRow][1]
String CoefGuessDispW_FName=DataLocation+"CoefGuessDispW"
String CoefGuessDispSelW_FName=DataLocation+"CoefGuessDispSelW"
String ConstraintW_FName=DataLocation+"ConstraintW"
String HilightW_FName=DataLocation+"HilightW"
String CoefGuessM_FName=DataLocation+"CoefGuessM" //Use for fitting
String ConstraintV_FName=DataLocation+"ConstraintV" //Use for fitting
String DataW_FName=DataLocation+DataName //Raw data
String BgW_FName=DataW_FName+"_BG" //Background
String Data_nBGW_FName=DataW_FName+"_nBG" //Data after BG subtraction
String Data_GssW_FName=DataW_FName+"_Gss" //Guess curve
variable i=0
String Data_Comp_FName=DataW_FName+"_p"+num2str(i) //Individual GLA component
End
Menu "SLPA"
"Multi-GLAs Fit..",SLP_MGFit_CreatePanel()
End
Function SLP_MGFit_CreatePanel() : Panel
//Init
if (!DataFolderExists("root:Package_SLP:MGFit"))
SLP_MGFit_init()
Endif
Dowindow /K SLP_MultiGLAFit_01
PauseUpdate; Silent 1 // building window...
NewPanel /W=(45,45,1150,670) /N=SLP_MultiGLAFit_01
SetDrawLayer UserBack
SetDrawEnv fsize= 14
DrawText 10,25,"SLP Multi GLA Peaks Fitting Panel"
DrawText 380,30,"Parameter Guess and Results"
DrawText 915,25,"Constraints and Hold"
DrawText 380,280,"Peak library"
DrawText 427,508,"Peak area"
DrawText 379,570,"Area under curve"
DrawText 915,240,"Data list"
SetDrawEnv fsize= 10
DrawText 452,522,"Guess"
SetDrawEnv fsize= 10
DrawText 468,538,"Fit"
SetDrawEnv fsize= 10
DrawText 916,179,"Extra constraints:"
//SetVariable Setvar_N_Peaks,pos={378,13},size={170,15},title="Number of GLA peak(s)",noEdit=1
NVAR GDataRow=root:Package_SLP:MGFit:GDataRow
Variable a=30,b=60,c=90
ListBox ListBox_PeakParam,pos={380,33},size={530,215},ListWave=root:Package_SLP:MGFit:SLP_MGFit_iCoefGuessDisplayW ,SelWave=root:Package_SLP:MGFit:SLP_MGFit_iCoefGuessDisplaySelW
ListBox ListBox_PeakParam,widths={32,45,85,a,a,a,a,a,a,a,a,a,a,0,0,0},userColumnResize=1
ListBox ListBox_PeakParam,mode=2,proc=ListBoxProc_MGFit_CoefGuess,SelRow=0,colorWave=root:Package_SLP:MGFit:ListColors
ListBox ListBox_PeakConstraints,pos={915,31},size={180,110},ListWave=root:Package_SLP:MGFit:SLP_MGFit_ConstraintDisplayW, SelWave=root:Package_SLP:MGFit:SLP_MGFit_ConstraintDisplaySelW
ListBox ListBox_PeakConstraints,widths={50,a,a,32,a},userColumnResize=1
ListBox ListBox_PeakConstraints proc=ListBoxProc_MGFit_Constraints
ListBox ListBox_DataList,pos={915,261},size={180,224},ListWave=root:Package_SLP:MGFit:SLP_MGFit_DataListDisplayW, Selwave=root:Package_SLP:MGFit:SLP_MGFit_DataListDisplaySelW
ListBox ListBox_DataList,widths={32,50,100},SelRow=GDataRow,userColumnResize=1
ListBox ListBox_DataList,mode=2,proc=ListBoxProc_MGFit_DataSelect
ListBox ListBox_Library,pos={380,285},size={530,130},ListWave=root:Package_SLP:MGFit:SLP_MGFit_PeakLibraryW,SelWave=root:Package_SLP:MGFit:SLP_MGFit_PeakLibrarySelW
ListBox ListBox_Library,widths={32,50,100,a,a,a,a,a,a,a,a,a,a,a,a,a},userColumnResize=1
ListBox list_PeakArea,pos={485,494},size={601,64},mode=6,proc=ListBoxProc_MGFit_AreaRatio
ListBox list_PeakArea,listWave=root:Package_SLP:MGFit:SLP_MGFit_PeakAreaW
ListBox list_PeakArea,widths={b,b,b,b,b,b,b,b,b,b,b,b,b,b,b,b,b,b,b,b,b}
ListBox list_PeakArea,userColumnResize= 1
ListBox list_CurveArea,pos={483,562},size={601,54},mode=6,proc=ListBoxProc_MGFit_AreaRatio
ListBox list_CurveArea,listWave=root:Package_SLP:MGFit:SLP_MGFit_CurveAreaW
ListBox list_CurveArea,widths={c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c,c}
ListBox list_CurveArea,userColumnResize= 1
Variable SliderGroup_Xpos=10
Variable SliderGroup_Ypos=375
Variable SliderGroup_vspacing=67
Variable SliderGroup_hWidth=255
SetDrawLayer UserBack
SetDrawEnv fsize= 10; DrawText SliderGroup_Xpos,SliderGroup_Ypos-10,"Intensity"
SetDrawEnv fsize= 10; DrawText SliderGroup_Xpos+62,SliderGroup_Ypos-10,"Position"
SetDrawEnv fsize= 10; DrawText SliderGroup_Xpos+62,SliderGroup_Ypos-10+SliderGroup_vspacing,"FWHM"
SetDrawEnv fsize= 10; DrawText SliderGroup_Xpos+62,SliderGroup_Ypos-10+2*SliderGroup_vspacing,"Mixture"
SetDrawEnv fsize= 10; DrawText SliderGroup_Xpos+62,SliderGroup_Ypos-10+3*SliderGroup_vspacing,"Asymmetry"
Slider slider_Int,pos={SliderGroup_Xpos,SliderGroup_Ypos},size={60,190}
Slider slider_Int,limits={0,2,0.05},value= 0,ticks=10,proc=SliderProc_MGFit_CoefAdjust
Slider slider_Pos,pos={SliderGroup_Xpos+60,SliderGroup_Ypos-10},size={SliderGroup_hWidth,45}
Slider slider_Pos,limits={270,350,0.1},value= 0,ticks=10,vert= 0,proc=SliderProc_MGFit_CoefAdjust
Slider slider_Fwhm,pos={SliderGroup_Xpos+60,SliderGroup_Ypos-10+SliderGroup_vspacing},size={SliderGroup_hWidth,45}
Slider slider_Fwhm,limits={0.3,5,0.1},value= 0,ticks=10,vert= 0,proc=SliderProc_MGFit_CoefAdjust
Slider slider_Mix,pos={SliderGroup_Xpos+60,SliderGroup_Ypos-10+2*SliderGroup_vspacing},size={SliderGroup_hWidth,45}
Slider slider_Mix,limits={0.01,0.99,0.01},value= 0,ticks=10,vert= 0,proc=SliderProc_MGFit_CoefAdjust
Slider slider_As,pos={SliderGroup_Xpos+60,SliderGroup_Ypos-10+3*SliderGroup_vspacing},size={SliderGroup_hWidth,45}
Slider slider_As,limits={0.01,0.99,0.01},value= 0,ticks=10,vert= 0,proc=SliderProc_MGFit_CoefAdjust
SetVariable setvar_GssChisq,pos={11,323},size={150,15},title="Guess chi square"
SetVariable setvar_GssChisq,limits={-inf,inf,0},value= root:Package_SLP:MGFit:Gss_Chisq,noedit= 1
SetVariable setvar_GssChisq valueColor=(1,26221,39321)
SetVariable setvar_FitChisq,pos={181,323},size={150,15},title="Fit chi square"
SetVariable setvar_FitChisq,valueColor=(13102,26214,0)
SetVariable setvar_FitChisq,limits={-inf,inf,0},value= root:Package_SLP:MGFit:Fit_Chisq,noedit= 1
SetVariable setvar_LowX,pos={390,575},size={90,15},title="Low X",proc=SetVarProc_MGFit_AreaUnderCurve
SetVariable setvar_LowX,value= root:Package_SLP:MGFit:LowX
SetVariable SetVar_HighX,pos={390,600},size={90,15},title="High X",proc=SetVarProc_MGFit_AreaUnderCurve
SetVariable SetVar_HighX,value= root:Package_SLP:MGFit:HighX
SetVariable setvar_AreaRatio,pos={485,477},size={100,15},title="Area ratio"
SetVariable setvar_AreaRatio,limits={-inf,inf,0},value= root:Package_SLP:MGFit:AreaRatio,noedit= 1
SetVariable setvar_ExtraConstraints,pos={917,183},size={170,16},title=":"
SetVariable setvar_ExtraConstraints,proc=SetVarProc_ExtraConstraints,help={"Extra constraints examples: K1>K2;K3+K4=K5+K6"}
SetVariable setvar_ExtraConstraints,limits={-inf,inf,0},value= root:Package_SLP:MGFit:ExtraConstraints
PopupMenu popup_BgSel,pos={155,25},size={113,20},title="Background type",Proc=PopMenuProc_MGFit_MakeBG
PopupMenu popup_BgSel,mode=1,popvalue="None",value= #"\"None;Shirley;Erf;atan;Flat;Slope\""
Button button_Done,pos={857,466},size={50,20},title="Done",proc=ButtonProc_MGFit_Done,fsize=10
Button Button_ImportFromLib,pos={383,418},size={525,20},title="Import selected peak",fSize=10,proc=ButtonProc_MGFit_ImportFromLib
Button Button_AddLibItem,pos={383,442},size={100,20},proc=ButtonProc_MGFit_AddLibItem,title="Add to library..",fSize=10
Button Button_EditLib,pos={489,442},size={70,20},proc=ButtonProc_MGFit_EditLib,title="Edit library..",fSize=10
Button Button_RemoveLibItem,pos={564,442},size={120,20},proc=ButtonProc_MGFit_RemoveFromLib,title="Remove selected peak",fSize=10
Button Button_SaveLib,pos={689,442},size={95,20},proc=ButtonProc_MGFit_SaveLibAsTxt,title="Save library as..", fSize=10
Button Button_LoadLib,pos={789,442},size={120,20},proc=ButtonProc_MGFit_LoadLibFile,title="Load library from file..",fSize=10
Button Button_Export,pos={120,46},size={100,20},title="Export graph..",fsize=10,proc=ButtonProc_MGFit_ExportGraph
Button Button_AddData,pos={915,240},size={85,20},title="Add data wave",fsize=10,proc=ButtonProc_MGFit_LoadData
Button Button_ConstraintDefault,pos={915,145},size={51,16},title="Default",fsize=10,proc=ButtonProc_MGFit_DefConstraints
Button Button_EditConstraintDefault,pos={965,145},size={80,16},title="Edit default..",fsize=10,proc=ButtonProc_MGFit_EditConstDef
Button Button_DeleteData,pos={1005,240},size={85,20},title="Delete data..",fSize=10,proc=ButtonProc_MGFit_DeleteData
Button Button_CopyGssParam,pos={745,10},size={130,20},proc=ButtonProc_MGFit_CopyGssParam,title="Copy parameters from..",fSize=10
Button Button_Holdall,pos={1046,146},size={51,16},proc=ButtonProc_MGFit_HoldAllTogg,title="Hold all",fSize=10
Button Button_AddLibFromGss,pos={465,251},size={200,20},proc=ButtonProc_MGFit_AddLibItemGss,title="Add highlighted peak to library",fSize=10
Button button_Fit,pos={700,255},size={50,23},proc=ButtonProc_MGFit_Fit,title="FIT",fColor=(65535,21845,0)
Button Button_SaveGss,pos={555,11},size={90,20},proc=ButtonProc_MGFit_SaveGssAsTxt,title="Save guesses..",fSize=10
Button Button_LoadGss,pos={650,11},size={90,20},proc=ButtonProc_MGFit_LoadGssFile,title="Load guesses..",fSize=10
Button Button_AcceptFitCoef,pos={758,254},size={150,20},proc=ButtonProc_MGFit_AcceptFit,title="Accept new fit coefficients",fSize=10
Button Button_AdjBG,pos={10,46},size={100,20},proc=ButtonProc_MGFit_BGAdj,title="Adjust background",fSize=10
Button button_FineIntDec,pos={10,575},size={15,20}
Button button_FineIntDec,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title="V"
Button button_FineIntInc,pos={30,575},size={15,20}
Button button_FineIntInc,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title="^"
Button button_FinePosInc,pos={SliderGroup_Xpos+SliderGroup_hWidth+85,SliderGroup_Ypos-20},size={15,20}
Button button_FinePosInc,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title=">"
Button button_FinePosDec,pos={SliderGroup_Xpos+SliderGroup_hWidth+65,SliderGroup_Ypos-20},size={15,20}
Button button_FinePosDec,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title="<"
Button button_FineFwhmInc,pos={SliderGroup_Xpos+SliderGroup_hWidth+85,SliderGroup_Ypos-20+SliderGroup_vspacing},size={15,20}
Button button_FineFwhmInc,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title=">"
Button button_FineFWHMDec,pos={SliderGroup_Xpos+SliderGroup_hWidth+65,SliderGroup_Ypos-20+SliderGroup_vspacing},size={15,20}
Button button_FineFWHMDec,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title="<"
Button button_FineMixInc,pos={SliderGroup_Xpos+SliderGroup_hWidth+85,SliderGroup_Ypos-20+2*SliderGroup_vspacing},size={15,20}
Button button_FineMixInc,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title=">"
Button button_FineMixDec,pos={SliderGroup_Xpos+SliderGroup_hWidth+65,SliderGroup_Ypos-20+2*SliderGroup_vspacing},size={15,20}
Button button_FineMixDec,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title="<"
Button button_FineAsInc,pos={SliderGroup_Xpos+SliderGroup_hWidth+85,SliderGroup_Ypos-20+SliderGroup_vspacing*3},size={15,20}
Button button_FineAsInc,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title=">"
Button button_FineAsDec,pos={SliderGroup_Xpos+SliderGroup_hWidth+65,SliderGroup_Ypos-20+SliderGroup_vspacing*3},size={15,20}
Button button_FineAsDec,fSize=10,proc=ButtonProc_MGFit_FineAdjust,title="<"
Button Button_ChangeFineSteps,pos={7,598},size={70,20},proc=ButtonProc_FineStepValues,title="Fine steps.."
Button Button_ChangeFineSteps,fSize=10
CheckBox check_DisplayOriginal,pos={10,28},size={50,15},title="Original",value= 0,proc=CheckProc_MGFit_DisplayOrgBG
CheckBox check_DisplayBg,pos={70,28},size={69,15},title="Background",value= 0,proc=CheckProc_MGFit_DisplayOrgBG
CheckBox check_DispFit,pos={282,51},size={59,15},proc=CheckProc_MGFit_DispFit,title="Show fit result"
Display/W=(12,71,366,317)/HOST=SLP_MultiGLAFit_01
RenameWindow #,G0
SetActiveSubwindow ##
Wave /T SLP_MGFit_DataListW=root:Package_SLP:MGFit:SLP_MGFit_DataListW
If (Dimsize(SLP_MGFit_DataListW,0)>0)
String DataName=SLP_MGFit_DataListW[GDataRow][0]
SLP_MGFit_DisplaySelectedData(DataName)
EndIf
End
Function SLP_MGFit_Init()
String Current_folder=getdatafolder(1)
NewDataFolder /O root:Package_SLP
NewDataFolder /O root:Package_SLP:MGFit
SetDataFolder root:Package_SLP:MGFit
variable /G N_peaks=1
Variable /G MaxN_peaks=64
variable /G GDataRow=0
variable /G GLA_int=0
variable /G GLA_pos=0
variable /G GLA_fwhm=0
variable /G GLA_mix=0
variable /G GLA_as=0
variable /G Init_int=1
variable /G Init_pos=0
variable /G Init_fwhm=1
variable /G Init_mix=0.5
variable /G Init_as=0.5
variable /G PosRange=0
variable /G Pos_pm_flg=0
variable /G Gss_Chisq
variable /G Fit_Chisq
variable /G LowX //to calculate area under curve
variable /G HighX //to calculate area under curve
variable /G AreaRatio
variable /G FineIntStep=0.01
variable /G FinePosStep=0.01
variable /G fineFwhmStep=0.05
variable /G fineMixStep=0.001
variable /G fineAsStep=0.001
String /G ExtraConstraints=""
Make /O/T/N=(0,64) SLP_MGFit_DataListW
SetDimLabel 1,0,DataName,SLP_MGFit_DataListW
SetDimLabel 1,1,DataFolder,SLP_MGFit_DataListW
SetDimLabel 1,2,OrgData,SLP_MGFit_DataListW
SetDimLabel 1,3,N_Peaks,SLP_MGFit_DataListW
SetDimLabel 1,4,Peak_Sel,SLP_MGFit_DataListW
SetDimLabel 1,5,BG_Type,SLP_MGFit_DataListW
SetDimLabel 1,6,BG_Param0,SLP_MGFit_DataListW
SetDimLabel 1,7,BG_Param1,SLP_MGFit_DataListW
SetDimLabel 1,8,BG_Param2,SLP_MGFit_DataListW
SetDimLabel 1,9,BG_Param3,SLP_MGFit_DataListW
SetDimLabel 1,10,BG_Param4,SLP_MGFit_DataListW
SetDimLabel 1,11,BG_Param5,SLP_MGFit_DataListW
SetDimLabel 1,12,BG_Param6,SLP_MGFit_DataListW
SetDimLabel 1,13,BG_Param7,SLP_MGFit_DataListW
SetDimLabel 1,14,BG_Param8,SLP_MGFit_DataListW
SetDimLabel 1,15,GssChiSq,SLP_MGFit_DataListW
SetDimLabel 1,16,FitChiSq,SLP_MGFit_DataListW
SetDimLabel 1,17,ShowFit_Flg,SLP_MGFit_DataListW //Show fit result instead of guess
SetDimLabel 1,18,LowX,SLP_MGFit_DataListW //For area under curve calculations
SetDimLabel 1,19,HighX,SLP_MGFit_DataListW //For area under curve calculations
SetDimLabel 1,20,XConstraints,SLP_MGFit_DataListW //Extra constraints e.g. K1>K2..
Make /O/T/N=(0,16) SLP_MGFit_DataListDisplayW
SetDimLabel 1,0,Select,SLP_MGFit_DataListDisplayW
SetDimLabel 1,1,DataName,SLP_MGFit_DataListDisplayW
SetDimLabel 1,2,DataNote,SLP_MGFit_DataListDisplayW
Make /O/N=(0,16) SLP_MGFit_DataListDisplaySelW
Make /O/T/N=(MaxN_peaks,16) SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,0,Select,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,1,PeakName,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,2,PeakNote,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,3,Int,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,4,Pos,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,5,FWHM,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,6,Mix,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,7,As,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,8,RInt,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,9,RPos,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,10,RFWHM,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,11,RMix,SLP_MGFit_iCoefGuessDisplayW
SetDimLabel 1,12,RAs,SLP_MGFit_iCoefGuessDisplayW
SLP_MGFit_iCoefGuessDisplayW[][1]="p"+num2str(p)
SLP_MGFit_iCoefGuessDisplayW[][3]=num2str(Init_int)
SLP_MGFit_iCoefGuessDisplayW[][4]=num2str(Init_pos)
SLP_MGFit_iCoefGuessDisplayW[][5]=num2str(Init_fwhm)
SLP_MGFit_iCoefGuessDisplayW[][6]=num2str(Init_mix)
SLP_MGFit_iCoefGuessDisplayW[][7]=num2str(Init_as)
Make /O/N=(MaxN_peaks,16,2) SLP_MGFit_iCoefGuessDisplaySelW //Layer2 = cell color
SLP_MGFit_iCoefGuessDisplaySelW[][0][0]=32 //Checkbox (unchecked)
SLP_MGFit_iCoefGuessDisplaySelW[][2,7][0]=2 //Editable (peak description)
Make /O/T/N=(5,8) SLP_MGFit_ConstraintDisplayW
SetDimLabel 1,0,CoefName,SLP_MGFit_ConstraintDisplayW
SetDimLabel 1,1, MinimumVal,SLP_MGFit_ConstraintDisplayW
SetDimLabel 1,2, MaximumVal,SLP_MGFit_ConstraintDisplayW
SetDimLabel 1,3,Hold,SLP_MGFit_ConstraintDisplayW
SetDimLabel 1,4,Kn,SLP_MGFit_ConstraintDisplayW
SLP_MGFit_ConstraintDisplayW[0][0]={"Intensity","Position","FWHM","Mixture","Assymetry"}
SLP_MGFit_ConstraintDisplayW[0][1]={"0","NaN","0.3","0.01","0.01"}
SLP_MGFit_ConstraintDisplayW[0][2]={"NaN","NaN","5","0.99","0.99"}
Duplicate /O/T SLP_MGFit_ConstraintDisplayW,SLP_MGFit_DefaultConstraintW
Make /O/N=(5,8,2) SLP_MGFit_ConstraintDisplaySelW //Layer2 = cell color
SLP_MGFit_ConstraintDisplaySelW[][1,2][0]=2
SLP_MGFit_ConstraintDisplaySelW[][3][0]=32
Duplicate /O SLP_MGFit_ConstraintDisplaySelW,SLP_MGFit_DefaultConstraintSelW
Make /O/T/N=(6,32) SLP_MGFit_PeakLibraryW
SetDimLabel 1,0,Select,SLP_MGFit_PeakLibraryW
SetDimLabel 1,1,Name,SLP_MGFit_PeakLibraryW
SetDimLabel 1,2,PeakNote,SLP_MGFit_PeakLibraryW
SetDimLabel 1,3,Int,SLP_MGFit_PeakLibraryW
SetDimLabel 1,4,Pos,SLP_MGFit_PeakLibraryW
SetDimLabel 1,5,FWHM,SLP_MGFit_PeakLibraryW
SetDimLabel 1,6,Mix,SLP_MGFit_PeakLibraryW
SetDimLabel 1,7,As,SLP_MGFit_PeakLibraryW
SetDimLabel 1,9,IntMin,SLP_MGFit_PeakLibraryW
SetDimLabel 1,10,IntMax,SLP_MGFit_PeakLibraryW
SetDimLabel 1,11,PosMin,SLP_MGFit_PeakLibraryW
SetDimLabel 1,12,PosMax,SLP_MGFit_PeakLibraryW
SetDimLabel 1,13,FWHMMin,SLP_MGFit_PeakLibraryW
SetDimLabel 1,14,FWHMMax,SLP_MGFit_PeakLibraryW
SetDimLabel 1,15,MixMin,SLP_MGFit_PeakLibraryW
SetDimLabel 1,16,MixMax,SLP_MGFit_PeakLibraryW
SetDimLabel 1,17,AsMin,SLP_MGFit_PeakLibraryW
SetDimLabel 1,18,AsMax,SLP_MGFit_PeakLibraryW
SLP_MGFit_PeakLibraryW[0][1]={{"C1s Atomic"},{""},{"1"},{"283"},{"1"},{"0.5"},{"0.5"}}
SLP_MGFit_PeakLibraryW[1][1]={{"C1s C-C"},{""},{"1"},{"284"},{"1"},{"0.5"},{"0.5"}}
SLP_MGFit_PeakLibraryW[2][1]={{"C1s C-OH"},{""},{"1"},{"285"},{"1"},{"0.5"},{"0.5"}}
SLP_MGFit_PeakLibraryW[3][1]={{"C1s C=O"},{""},{"1"},{"286"},{"1"},{"0.5"},{"0.5"}}
SLP_MGFit_PeakLibraryW[4][1]={{"C1s COOH"},{""},{"1"},{"288"},{"1"},{"0.5"},{"0.5"}}
SLP_MGFit_PeakLibraryW[5][1]={{"C1s C-NH3"},{""},{"1"},{"285"},{"1"},{"0.5"},{"0.5"}}
Make /O/N=(6,32) SLP_MGFit_PeakLibrarySelW
SLP_MGFit_PeakLibrarySelW[][0]=32
SLP_MGFit_PeakLibrarySelW[][2]=2
Make/O/W/U ListColors= {{0,0,0},{65535,0,0},{25000,25000,25000},{0,0,65535},{0,65535,65535}}
MatrixTranspose ListColors
make /O/T /N=(2,16) SLP_MGFit_CurveAreaW
SLP_MGFit_CurveAreaW=""
make /O/T /N=(3,MaxN_peaks) SLP_MGFit_PeakAreaW
SLP_MGFit_PeakAreaW=""
SLP_MGFit_PeakAreaW[0][]="p"+num2str(q)
Setdatafolder $Current_folder
End
Function SetVarProc_MGFit_AreaUnderCurve(sva) : SetVariableControl
STRUCT WMSetVariableAction &sva
switch( sva.eventCode )
case 1: // mouse up
case 2: // Enter key
case 3: // Live update
Variable dval = sva.dval
String sval = sva.sval
ControlInfo /W=SLP_MultiGLAFit_01 ListBox_DataList
Variable DataRow=V_Value
Wave /T SLP_MGFit_DataListW=root:Package_SLP:MGFit:SLP_MGFit_DataListW
String DataName=SLP_MGFit_DataListW[DataRow][0]
SLP_MGFit_ReadAreaUnderCurve(DataName)
NVAR LowX=root:Package_SLP:MGFit:LowX
NVAR HighX=root:Package_SLP:MGFit:HighX
SLP_MGFit_DataListW[DataRow][18]=num2str(LowX)
SLP_MGFit_DataListW[DataRow][19]=num2str(HighX)
SLP_MGFit_DrawVLine(dVal)
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProc_MGFit_AddLibItemGss(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
// click code here
ControlInfo /W=SLP_MultiGLAFit_01 ListBox_DataList
Variable DataRow=V_Value
ControlInfo /W=SLP_MultiGLAFit_01 ListBox_PeakParam
Variable PeakRow=V_Value
Wave /T SLP_MGFit_DataListW=root:Package_SLP:MGFit:SLP_MGFit_DataListW
Wave /T SLP_MGFit_PeakLibraryW=root:Package_SLP:MGFit:SLP_MGFit_PeakLibraryW
Wave SLP_MGFit_PeakLibrarySelW=root:Package_SLP:MGFit:SLP_MGFit_PeakLibrarySelW
String DataName=SLP_MGFit_DataListW[DataRow][0]
String DataLocation=SLP_MGFit_DataListW[DataRow][1]
String CoefGuessDispW_FName=DataLocation+"CoefGuessDispW"
String ConstraintW_FName=DataLocation+"ConstraintW"
Wave /T CoefGuessDispW=$CoefGuessDispW_FName
Wave ConstraintW=$ConstraintW_FName
String PeakName=CoefGuessDispW[PeakRow][1]
String PeakNote=CoefGuessDispW[PeakRow][2]
variable int=str2num(CoefGuessDispW[PeakRow][3]),pos=str2num(CoefGuessDispW[PeakRow][4])
variable fwhm=str2num(CoefGuessDispW[PeakRow][5]),mix=str2num(CoefGuessDispW[PeakRow][6])
Variable as=str2num(CoefGuessDispW[PeakRow][7])
variable int_min=ConstraintW[0][0][PeakRow],pos_min=ConstraintW[1][0][PeakRow],fwhm_min=ConstraintW[2][0][PeakRow],mix_min=ConstraintW[3][0][PeakRow],as_min=ConstraintW[4][0][PeakRow]
variable int_max=ConstraintW[0][1][PeakRow],pos_max=ConstraintW[1][1][PeakRow],fwhm_max=ConstraintW[2][1][PeakRow],mix_max=ConstraintW[3][1][PeakRow],as_max=ConstraintW[4][1][PeakRow]
Redimension /N=(dimsize(SLP_MGFit_PeakLibraryW,0)+1,dimsize(SLP_MGFit_PeakLibraryW,1)) SLP_MGFit_PeakLibraryW
Redimension /N=(dimsize(SLP_MGFit_PeakLibrarySelW,0)+1,dimsize(SLP_MGFit_PeakLibrarySelW,1)) SLP_MGFit_PeakLibrarySelW
SLP_MGFit_PeakLibrarySelW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][0]=32
SLP_MGFit_PeakLibrarySelW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][2]=2
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][1]=PeakName
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][2]=PeakNote
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][3]=Num2str(int)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][4]=Num2str(pos)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][5]=Num2str(fwhm)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][6]=Num2str(mix)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][7]=Num2str(as)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][8]=Num2str(int_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][9]=Num2str(int_max)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][10]=Num2str(pos_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][11]=Num2str(pos_max)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][12]=Num2str(fwhm_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][13]=Num2str(fwhm_max)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][14]=Num2str(mix_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][15]=Num2str(mix_max)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][16]=Num2str(as_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][17]=Num2str(as_min)
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProc_MGFit_AddLibItem(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
// click code here
String PeakName,PeakNote
variable int=NaN,pos=NaN,fwhm=NaN,mix=NaN,as=NaN
variable int_min=NaN,pos_min=NaN,fwhm_min=NaN,mix_min=NaN,as_min=NaN
variable int_max=NaN,pos_max=NaN,fwhm_max=NaN,mix_max=NaN,as_max=NaN
Prompt PeakName,"Peak Name"
Prompt PeakNote,"Note"
Prompt int,"Intensity"
Prompt pos,"Position"
prompt fwhm,"FWHM"
prompt mix,"Mixture"
prompt as,"Asymmetry"
Doprompt "Enter peak parameters",PeakName,PeakNote,int,pos,fwhm,mix,as
If (V_Flag==0) //If user clicks ok
Prompt int_min,"Min intensity"
Prompt int_max,"Max intensity"
Prompt pos_min,"Min position"
Prompt pos_max,"Max position"
prompt fwhm_min,"Min FWHM"
prompt fwhm_max,"Max FWHM"
prompt mix_Min,"Min mixture"
prompt mix_Max,"Max mixture"
prompt as_min,"Min Asymmetry"
prompt as_max,"Max Asymmetry"
Doprompt "Enter peak parameters",int_min,int_max,pos_min,pos_max,fwhm_min,fwhm_max,mix_min,mix_max,as_min,as_max
If (V_Flag==0) //if user clicks ok
Wave /T SLP_MGFit_PeakLibraryW=root:Package_SLP:MGFit:SLP_MGFit_PeakLibraryW
Wave SLP_MGFit_PeakLibrarySelW=root:Package_SLP:MGFit:SLP_MGFit_PeakLibrarySelW
Redimension /N=(dimsize(SLP_MGFit_PeakLibraryW,0)+1,dimsize(SLP_MGFit_PeakLibraryW,1)) SLP_MGFit_PeakLibraryW
Redimension /N=(dimsize(SLP_MGFit_PeakLibrarySelW,0)+1,dimsize(SLP_MGFit_PeakLibrarySelW,1)) SLP_MGFit_PeakLibrarySelW
SLP_MGFit_PeakLibrarySelW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][0]=32
SLP_MGFit_PeakLibrarySelW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][2]=2
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][1]=PeakName
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][2]=PeakNote
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][3]=Num2str(int)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][4]=Num2str(pos)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][5]=Num2str(fwhm)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][6]=Num2str(mix)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][7]=Num2str(as)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][8]=Num2str(int_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][9]=Num2str(int_max)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][10]=Num2str(pos_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][11]=Num2str(pos_max)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][12]=Num2str(fwhm_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][13]=Num2str(fwhm_max)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][14]=Num2str(mix_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][15]=Num2str(mix_max)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][16]=Num2str(as_min)
SLP_MGFit_PeakLibraryW[dimsize(SLP_MGFit_PeakLibrarySelW,0)-1][17]=Num2str(as_min)
EndIf
EndIf
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProc_MGFit_ExportGraph(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
// click code here
ControlInfo /W=SLP_MultiGLAFit_01 ListBox_DataList
Variable DataRow=V_Value
ControlInfo /W=SLP_MultiGLAFit_01 ListBox_PeakParam
Variable PeakRow=V_Value
Wave /T SLP_MGFit_DataListW=root:Package_SLP:MGFit:SLP_MGFit_DataListW
String DataName=SLP_MGFit_DataListW[DataRow][0]
String DataLocation=SLP_MGFit_DataListW[DataRow][1]
String DataW_FName=DataLocation+DataName //Raw data
String BgW_FName=DataW_FName+"_BG" //Background
String Data_nBGW_FName=DataW_FName+"_nBG" //Data after BG subtraction
String Data_GssW_FName=DataW_FName+"_Gss" //Guess curve
Wave Data_nBGW=$Data_nBGW_FName
String TraceList=TraceNameList("SLP_MultiGLAFit_01#G0",";",1)
Variable N_curves=Itemsinlist(TraceList,";")
String NewFolderName=":"+DataName
String TraceName=""
String orgW_FName=""
String destW_Name=""
variable i=0
variable run_flg=0
String LegendStr=DataName+"\r\Zr080"
String FolderExistsWarning="Enter new folder name?"
//Check if the folder to keep waves already exists
If (!DataFolderExists(NewFolderName))
run_flg=1