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Picard SD_COVERAGE wrong column label in the html report #1888

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B3rse opened this issue Mar 21, 2023 · 1 comment · Fixed by #1955
Closed
4 tasks done

Picard SD_COVERAGE wrong column label in the html report #1888

B3rse opened this issue Mar 21, 2023 · 1 comment · Fixed by #1955
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bug: module Bug in a MultiQC module

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@B3rse
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B3rse commented Mar 21, 2023

Description of bug

multiqc, version 1.14 (1e79a52)

In the html report, the column corresponding to SD_COVERAGE from Picard wgs_metrics is wrongly labelled as Median Coverage.

File that triggers the error

Screen Shot 2023-03-21 at 11 00 34 AM

MultiQC Error log

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Before submitting

  • I have read the troubleshooting documentation.
  • I am using the latest release of MultiQC.
  • I have included a full MultiQC log, not truncated.
  • I have attached an input file (.zip if necessary) that triggers the error.
@ewels ewels added the bug: module Bug in a MultiQC module label Mar 22, 2023
pontushojer added a commit to pontushojer/MultiQC that referenced this issue Jul 13, 2023
@pontushojer
fix MultiQC#1888
839c21c
@pontushojer pontushojer mentioned this issue Jul 13, 2023
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@ewels
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ewels commented Jul 30, 2023

Thanks for reporting, and thanks for the fix @pontushojer !

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bug: module Bug in a MultiQC module
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Fix wrong column label in submodule WgsMetrics pontushojer/MultiQC
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@ewels @B3rse