This Docker container provides a Jupyter Notebook interface to the functionality from the R/Bioconductor package flowcatchR. It is based on the jupyter/demo Docker image.
This app needs a recent version of Docker:
- Docker installation instructions
- type
docker pull federicomarini/flowjupy - ... or alternatively clone this repository (
git clone https://github.com/federicomarini/flowjupy.git) and build the image locally withcd flowjupy && docker build -t flowjupy .
docker run -p 8888:8888 federicomarini/flowjupy- If all goes well
- On Linux, browse to http://localhost:8888 for the Jupyter notebook interface available in the home folder to find example notebooks illustrating the usage of the
flowcatchRpackage - On MacOS or Windows running
Docker Toolboxfind the Docker host URL withdocker-machine ip default|[name of the virtual machine]and browse tohttp://[thatIPaddress]:8888
- On Linux, browse to http://localhost:8888 for the Jupyter notebook interface available in the home folder to find example notebooks illustrating the usage of the
flowstudio- https://github.com/federicomarini/flowstudioflowshiny- https://github.com/federicomarini/flowshinydockerflow- https://github.com/federicomarini/dockerflow
For additional details regarding the functions of flowcatchR, please consult the package documentation, the package vignette or write an email to marinif@uni-mainz.de.
Please use https://github.com/federicomarini/flowcatchR/issues for reporting bugs, issues or for suggesting new features to be implemented.