preparing_configregion
Note: This file needs to be modified only when using Assembly Module alone.
When using Triti-Map for de novo sequence assembly, you need to use the trait association interval to filter the assembled sequences, which will be generated automatically if you run the full analysis modules; if you only run the Assembly Module, you need to fill in the filter interval in the region.csv configuration file in advance.
A typical filter interval information file region.csv is shown below.
chrom,start,end
chr7A,724000000,730000000
-
chrom: chromosome where the interval is positioned -
start: position of the start of the interval -
end: position of the end of the interval
