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RAxML info parsing bug #122

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wants to merge 3 commits into from
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RAxML info parsing bug #122

wants to merge 3 commits into from

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jgolob
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@jgolob jgolob commented Mar 30, 2018

Subtle change to regex that detects which kind of alignment. Previously AA anywhere in the info file (which can happen in sequence IDs randomly) would result in taxtastic assuming an amino acid alignment. This change makes the regex a bit more precise.

jgolob and others added 2 commits March 30, 2018 15:49
If AA was anywhere in the file, taxtastic would assume it was an amino acid alingment

Corrected regex to be more specific.
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Please reconsider this PR. The bug still remains in current versions of taxtastic, causing issues using reference packages created with this bug in place.

@jgolob jgolob closed this Jun 21, 2019
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