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bcftbx/utils: fixes for Python 2/3 compatibility #126

Merged
merged 5 commits into from Sep 13, 2019
Merged

bcftbx/utils: fixes for Python 2/3 compatibility #126

merged 5 commits into from Sep 13, 2019

Commits on Sep 13, 2019

  1. bcftbx/utils: fix relative imports in unit tests, for Python3 compati… 

    …bility.
    @pjbriggs
    pjbriggs committed Sep 13, 2019
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  2. bcftbx/utils: import Python 3 compatible 'range' function and use ins… 

    …tead of 'xrange'.
    @pjbriggs
    pjbriggs committed Sep 13, 2019
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  3. bcftbx/utils: reimplement use of 'max' function for Python3 (to handl… 

    …e 'None').
    @pjbriggs
    pjbriggs committed Sep 13, 2019
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  4. bcftbx/utils: fixes to 'getlines' (and tests) to explicitly read data… 

    … as 'text' (for Python 2/3 compatibility).
    @pjbriggs
    pjbriggs committed Sep 13, 2019
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  5. bcftbx/utils: update unit tests for 'concatenate_fastq_files' handlin… 

    …g gzipped Fastqs, for Python 2/3 compatibility.
    @pjbriggs
    pjbriggs committed Sep 13, 2019
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