- BoxPlots
- Heatmap And Statistics
- PCA
- QC
- Explorer and discover new relationships
This web app is written using the shiny framework, a package from RStudio that can be used to build interactive web pages with R. The code is split into two parts, the user interface and the server-side containing the logic. The HTML widgets framework is used for binding JavaScript data visualizations in R and numerous HTML widgets and R packages are used including plotly, DT, d3heatmap, shinydashboard and ggplot2.The user interface is currently organized into the following dashboard tabs: “Upload ADAT file”, “BoxPlots”, “Heatmap And Statistics”, “PCA”, “Download” and “Help”.
Is Cited by the Following Articles:
Assessment of Variability in the SOMAscan Assay, Scientific Reports 7(1), DOI: http://doi.org/10.1038/s41598-017-14755-5 Plasma proteomic signature of age in healthy humans, Aging Cell 17(5), DOI: http://doi.org/10.1111/acel.12799 Aptamer-based proteomics of serum and plasma in acquired aplastic anemia, Experimental Hematology DOI: http://doi.org/10.1016/j.exphem.2018.09.008 Characterization of the plasma proteomic profile of frailty phenotype, GeroScience DOI: http://doi.org/10.1007/s11357-020-00288-9 Colchicine’s effects on metabolic and inflammatory molecules in adults with obesity and metabolic syndrome: results from a pilot randomized controlled trial, International Journal of Obesity DOI: http://doi.org/10.1038/s41366-020-0598-3 Plasma proteomic signature of the risk of developing mobility disability: A 9‐year follow‐up, Aging Cell DOI: http://doi.org/10.1111/acel.13132 Highly multiplexed proteomic assessment of human bone marrow in acute myeloid leukemia, Blood Advances 4(2), DOI: http://doi.org/10.1182/bloodadvances.2019001124 Multimodal immune phenotyping of maternal peripheral blood in normal human pregnancy, JCI Insight 5(7), DOI: http://doi.org/10.1172/jci.insight.134838 A Plasma Proteomic Signature of Skeletal Muscle Mitochondrial Function, International Journal of Molecular Sciences 21(24), DOI: http://doi.org/10.3390/ijms21249540 Plasma proteomic biomarker signature of age predicts health and life span, eLife DOI: http://doi.org/10.7554/eLife.61073 A replication-competent adenovirus-vectored influenza vaccine induces durable systemic and mucosal immunity, Journal of Clinical Investigation 131(5), DOI: http://doi.org/10.1172/JCI140794 Broadly effective metabolic and immune recovery with C5 inhibition in CHAPLE disease, Nature Immunology DOI: http://doi.org/10.1038/s41590-020-00830-z
This web tool is an open source project, and the source code is available at https://github.com/foocheung/adat
This web tool is licensed under the Apache licence. © Foo Cheung (2017)