biology/bcf-score: Unbreak build with clang 16

Patch function pointer assignments that went from warning to error with the compiler upgrade Reported by: pkg-fallout
freebsd · Jul 16, 2023 · 63e5ba4 · 63e5ba4
1 parent e7f65a5
commit 63e5ba4
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diff --git a/biology/bcf-score/Makefile b/biology/bcf-score/Makefile
@@ -1,5 +1,6 @@
 PORTNAME=	bcf-score
 DISTVERSION=	1.16
+PORTREVISION=	1
 CATEGORIES=	biology
 MASTER_SITES=	https://software.broadinstitute.org/software/score/
 DISTFILES+=	score_${DISTVERSION}-20221221.tar.gz

diff --git a/biology/bcf-score/files/patch-plugins_munge.c b/biology/bcf-score/files/patch-plugins_munge.c
@@ -0,0 +1,11 @@
+--- plugins/munge.c.orig	2023-07-16 07:57:54 UTC
++++ plugins/munge.c
+@@ -120,7 +120,7 @@ int tsv_read_string(tsv_t *tsv, bcf1_t *rec, void *usr
+     return 0;
+ }
+
+-static const int (*tsv_setters[])(tsv_t *tsv, bcf1_t *rec, void *usr) = {tsv_setter_id_flexible,         // SNP
++static int (*tsv_setters[])(tsv_t *tsv, bcf1_t *rec, void *usr) = {tsv_setter_id_flexible,         // SNP
+                                                                          tsv_setter_pos_flexible,        // BP
+                                                                          tsv_setter_chrom_flexible,      // CHR
+                                                                          tsv_read_allele,                // A1
diff --git a/biology/bcf-score/files/patch-plugins_score.c b/biology/bcf-score/files/patch-plugins_score.c
@@ -0,0 +1,11 @@
+--- plugins/score.c.orig	2023-07-16 08:04:54 UTC
++++ plugins/score.c
+@@ -140,7 +140,7 @@ static int tsv_read_allele(tsv_t *tsv, bcf1_t *rec, vo
+     return 0;
+ }
+
+-static const int (*tsv_setters[])(tsv_t *tsv, bcf1_t *rec, void *usr) = {tsv_setter_id_flexible,         // SNP
++static int (*tsv_setters[])(tsv_t *tsv, bcf1_t *rec, void *usr) = {tsv_setter_id_flexible,         // SNP
+                                                                          tsv_setter_pos_flexible,        // BP
+                                                                          tsv_setter_chrom_flexible,      // CHR
+                                                                          tsv_read_allele,                // A1