math/scorec-core: update 2.2.7-55 → 2.2.8

Reported by: portscout
freebsd · Dec 25, 2023 · e7d61ea · e7d61ea
1 parent 7cac045
commit e7d61ea
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Showing 4 changed files with 14 additions and 12 deletions.
diff --git a/math/scorec-core/Makefile b/math/scorec-core/Makefile
@@ -1,8 +1,6 @@
 PORTNAME=	scorec-core
 DISTVERSIONPREFIX=	v
-DISTVERSION=	2.2.7-55
-PORTREVISION=	2
-DISTVERSIONSUFFIX=	-g83113372
+DISTVERSION=	2.2.8
 CATEGORIES=	math
 
 MAINTAINER=	yuri@FreeBSD.org
@@ -49,4 +47,6 @@ OPENMPI_USES=		mpi:openmpi
 
 PORTSCOUT=	limit:^.*[0-9]\.[0-9].* # prevent tags like remove_viz
 
+# 3 tests fail, see https://github.com/SCOREC/core/issues/410
+
 .include <bsd.port.mk>
diff --git a/math/scorec-core/distinfo b/math/scorec-core/distinfo
@@ -1,5 +1,5 @@
-TIMESTAMP = 1670233469
-SHA256 (SCOREC-core-v2.2.7-55-g83113372_GH0.tar.gz) = 0ee9c69b6dc3f0e8c38fca945112e3d81ec66f3a8e47a2474aafd695e55c3e33
-SIZE (SCOREC-core-v2.2.7-55-g83113372_GH0.tar.gz) = 1210395
+TIMESTAMP = 1703443096
+SHA256 (SCOREC-core-v2.2.8_GH0.tar.gz) = 5216d0d5ac031c9357a59986b1bc6f2cbdbac0356059e98a2bec78c1777a59e2
+SIZE (SCOREC-core-v2.2.8_GH0.tar.gz) = 1247064
 SHA256 (SCOREC-pumi-meshes-7b84de7_GH0.tar.gz) = 72f552318dac42aeebc6f1a2f4e7f7de4eaee69da7a32026d2b1e4081c28ed71
 SIZE (SCOREC-pumi-meshes-7b84de7_GH0.tar.gz) = 33991978
diff --git a/...scorec-core/files/patch-pumi_pumi__sys.cc → math/scorec-core/files/patch-pcu_pcu__mem.c b/...scorec-core/files/patch-pumi_pumi__sys.cc → math/scorec-core/files/patch-pcu_pcu__mem.c
@@ -1,6 +1,8 @@
---- pumi/pumi_sys.cc.orig	2022-12-05 09:50:18 UTC
-+++ pumi/pumi_sys.cc
-@@ -98,6 +98,8 @@ double pumi_getMem()
+- use of linux-specific function mallinfo(): https://github.com/SCOREC/core/issues/409
+
+--- pcu/pcu_mem.c.orig	2023-12-24 18:38:48 UTC
++++ pcu/pcu_mem.c
+@@ -44,6 +44,8 @@ double PCU_GetMem() {
    task_info(current_task(), TASK_BASIC_INFO, (task_info_t)&t_info, &t_info_count);
    size_t size = (resident ? t_info.resident_size : t_info.virtual_size);
    return (double)size/M;

diff --git a/math/scorec-core/pkg-plist b/math/scorec-core/pkg-plist
@@ -1,6 +1,5 @@
 bin/adaptLvlSetLoop
 bin/balance
-bin/box
 bin/chef
 bin/chefReadUrPrep
 bin/chefStream
@@ -18,6 +17,7 @@ bin/from_neper
 bin/from_ugrid
 bin/icesheet
 bin/intrude
+bin/matchedNodeElmReader
 bin/measureAnisoStats
 bin/measureIsoStats
 bin/mkmodel
@@ -133,8 +133,6 @@ lib/cmake/SCOREC/apf_zoltan-target-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/SCOREC/apf_zoltan-target.cmake
 lib/cmake/SCOREC/balance-target-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/SCOREC/balance-target.cmake
-lib/cmake/SCOREC/box-target-%%CMAKE_BUILD_TYPE%%.cmake
-lib/cmake/SCOREC/box-target.cmake
 lib/cmake/SCOREC/can-target.cmake
 lib/cmake/SCOREC/chef-target-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/SCOREC/chef-target.cmake
@@ -179,6 +177,8 @@ lib/cmake/SCOREC/lion-target-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/SCOREC/lion-target.cmake
 lib/cmake/SCOREC/ma-target-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/SCOREC/ma-target.cmake
+lib/cmake/SCOREC/matchedNodeElmReader-target-%%CMAKE_BUILD_TYPE%%.cmake
+lib/cmake/SCOREC/matchedNodeElmReader-target.cmake
 lib/cmake/SCOREC/mds-target-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/SCOREC/mds-target.cmake
 lib/cmake/SCOREC/measureAnisoStats-target-%%CMAKE_BUILD_TYPE%%.cmake