Skip to content
This repository has been archived by the owner on Jul 24, 2020. It is now read-only.

make multitool-container generation a little bit more stable #84

Merged
merged 10 commits into from
Nov 23, 2017

Conversation

bgruening
Copy link
Member

This PR should fix most errors I have seen the last month in generating multitool-containers.

https://github.com/BioContainers/multi-package-containers is using this branch currently.

@jmchilton jmchilton merged commit 9470e3a into master Nov 23, 2017
@bgruening bgruening deleted the tripple branch November 24, 2017 08:41
jmchilton added a commit to jmchilton/galaxy that referenced this pull request Jan 18, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
jmchilton added a commit to jmchilton/galaxy that referenced this pull request Jan 18, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
- Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
jmchilton added a commit to jmchilton/galaxy that referenced this pull request Jan 18, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
- Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
- Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca)
jmchilton added a commit to common-workflow-lab/galaxy that referenced this pull request Jan 19, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
- Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
jmchilton added a commit to common-workflow-lab/galaxy that referenced this pull request Feb 7, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
- Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
jmchilton added a commit to jmchilton/galaxy that referenced this pull request Feb 22, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
- Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
- Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca)
- Python 3 fix for linter (galaxyproject/galaxy-lib@17d1676).
jmchilton added a commit to jmchilton/galaxy that referenced this pull request Feb 22, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
- Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
- Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca)
- Python 3 fix for linter (galaxyproject/galaxy-lib@17d1676).
jmchilton added a commit that referenced this pull request Feb 22, 2018
Lost this change from #84.
jmchilton added a commit to jmchilton/galaxy that referenced this pull request Feb 22, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
- Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
- Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca)
- Python 3 fix for linter (galaxyproject/galaxy-lib@17d1676).
jmchilton added a commit to jmchilton/galaxy that referenced this pull request Feb 25, 2018
Includes:

- Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84.
- Fixes for Conda search problems galaxyproject/galaxy-lib#83.
- Updates to CWL library support galaxyproject/galaxy-lib#78.
- Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
- Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca)
- Python 3 fix for linter (galaxyproject/galaxy-lib@17d1676).
Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants