This repository has been archived by the owner on Jul 24, 2020. It is now read-only.
-
Notifications
You must be signed in to change notification settings - Fork 19
make multitool-container generation a little bit more stable #84
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
jmchilton
added a commit
to jmchilton/galaxy
that referenced
this pull request
Jan 18, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78.
jmchilton
added a commit
to jmchilton/galaxy
that referenced
this pull request
Jan 18, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78. - Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
jmchilton
added a commit
to jmchilton/galaxy
that referenced
this pull request
Jan 18, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78. - Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79) - Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca)
jmchilton
added a commit
to common-workflow-lab/galaxy
that referenced
this pull request
Jan 19, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78. - Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
jmchilton
added a commit
to common-workflow-lab/galaxy
that referenced
this pull request
Feb 7, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78. - Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79)
jmchilton
added a commit
to jmchilton/galaxy
that referenced
this pull request
Feb 22, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78. - Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79) - Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca) - Python 3 fix for linter (galaxyproject/galaxy-lib@17d1676).
jmchilton
added a commit
to jmchilton/galaxy
that referenced
this pull request
Feb 22, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78. - Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79) - Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca) - Python 3 fix for linter (galaxyproject/galaxy-lib@17d1676).
jmchilton
added a commit
to jmchilton/galaxy
that referenced
this pull request
Feb 22, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78. - Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79) - Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca) - Python 3 fix for linter (galaxyproject/galaxy-lib@17d1676).
jmchilton
added a commit
to jmchilton/galaxy
that referenced
this pull request
Feb 25, 2018
Includes: - Fixes for multi-requirement container building via mulled via galaxyproject/galaxy-lib#84. - Fixes for Conda search problems galaxyproject/galaxy-lib#83. - Updates to CWL library support galaxyproject/galaxy-lib#78. - Make bz2file dependency optional (xref galaxyproject/galaxy-lib#79) - Python 3 fixes for path stuff - runtime fixes caught because galaxy-lib runs tests using Python 3 galaxyproject/galaxy-lib@c056e39 and galaxyproject/galaxy-lib@c7cc9ca) - Python 3 fix for linter (galaxyproject/galaxy-lib@17d1676).
Sign up for free
to subscribe to this conversation on GitHub.
Already have an account?
Sign in.
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This PR should fix most errors I have seen the last month in generating multitool-containers.
https://github.com/BioContainers/multi-package-containers is using this branch currently.