- Feature1
Feature description.
- Track your original datasets more easily
When you add certain tags with a
#in front (e.g.#sample_A) to datasets they will be propagated through toolruns to subsequent datasets helping you to better orientate within history. Implemented in Pull Request 3704 Pull Request 3718 Pull Request 3719 Pull Request 3760 Pull Request 3868 Pull Request 3979- Drag & Drop datasets into tool inputs
Interface now allows dragging datasets from history panel into the content selectors of the tool form. Implemented in Pull Request 3871.
The code lives at Github and you should have Git to obtain it.
- To get a new Galaxy repository run:
$ git clone -b release_17.05 https://github.com/galaxyproject/galaxy.git
- To update an existing Galaxy repository run:
$ git checkout release_17.05 && git pull --ff-only origin release_17.05
See the communityhub for additional details regarding the source code locations.
Newly there is New Configuration Options section.
Below are the newly added options you can configure in galaxy.ini. To see the whole sample file visit our GitHub repository.
# Set to True to enable monitoring of the tool_data and shed_tool_data_path
# directories. If changes in tool data table files are found, the tool data
# tables for that data manager are automatically reloaded.
# Watchdog ( https://pypi.python.org/pypi/watchdog ) must be installed and
# available to Galaxy to use this option. Other options include 'auto'
# which will attempt to use the watchdog library if it is available but won't
# fail to load Galaxy if it is not and 'polling' which will use a less
# efficient monitoring scheme that may work in wider range of scenarios
# than the watchdog default.
#watch_tool_data_dir = False
# To run interactive environment containers in Docker Swarm mode (on an
# existing swarm), set this option to True and set `docker_connect_port` in the
# IE plugin config (ini) file(s) of any IE plugins you have enabled and ensure
# that you are not using any `docker run`-specific options in your plugins'
# `command_inject` options (swarm mode services run using `docker service
# create`, which has a different and more limited set of options). This option
# can be overridden on a per-plugin basis by using the `swarm_mode` option in
# the plugin's ini config file.
#interactive_environment_swarm_mode = False
# Galaxy can run a "swarm manager" service that will monitor utilization of the
# swarm and provision/deprovision worker nodes as necessary. The service has
# its own configuration file.
#swarm_manager_config_file = config/swarm_manager_conf.yml
# Log to graphite
# Graphite is an external statistics aggregator (https://github.com/graphite-project/carbon)
# Enabling the following options will cause galaxy to log request timing and
# other statistics to the configured graphite instance. The graphite_prefix is
# useful if you are running multiple Galaxy instances and want to segment
# statistics between them within the same aggregator.
#graphite_host=
#graphite_port=2003
#graphite_prefix=galaxy
# Enable the new container interface for Interactive Environments
#enable_beta_containers_interface = False