Fixes for installing R 3.1.2 on osx #509
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| <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable> | ||
| <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable> | ||
| <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include/ncursesw</environment_variable> | ||
| <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include/ncursesw</environment_variable> |
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Is this really ncurses__w__? I don't have this under Linux? Is this something specific to OS-X?
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Yes, this is what I found. Here is is on my Mac:
$ pwd
/Users/gvk/work/ts_install/tool_dependency_dir/ncurses/5.9/iuc/package_ncurses_5_9/77ecbc5b0449/include/ncursesw
MacBook-Pro-2:ncursesw gvk$ ll
total 368
drwxr-xr-x 11 gvk staff 374 Dec 29 20:25 .
drwxr-xr-x 3 gvk staff 102 Dec 29 20:25 ..
-rw-r--r-- 1 gvk staff 2891 Dec 29 20:25 eti.h
-rw-r--r-- 1 gvk staff 18005 Dec 29 20:25 form.h
-rw-r--r-- 1 gvk staff 11969 Dec 29 20:25 menu.h
-rw-r--r-- 1 gvk staff 93597 Dec 29 20:25 ncurses.h
-rw-r--r-- 1 gvk staff 3925 Dec 29 20:25 ncurses_dll.h
-rw-r--r-- 1 gvk staff 4072 Dec 29 20:25 panel.h
-rw-r--r-- 1 gvk staff 40299 Dec 29 20:25 term.h
-rw-r--r-- 1 gvk staff 3479 Dec 29 20:25 termcap.h
-rw-r--r-- 1 gvk staff 3109 Dec 29 20:25 unctrl.h
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Different revision, but it looks like this for me:
[galaxy@cn029 ~]$ ls -l /usr/local/tools/ncurses/5.9/iuc/package_ncurses_5_9/5e1760c773ba/include/
insgesamt 4
drwxr-xr-x+ 2 galaxy galaxy 4096 2. Aug 21:13 ncurses
This is unfortunate ....
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Seems to be different packages: openwrt/packages#526 one is with UTF-8 support. Let's figure our how we can compile the other one on your OS-X. There is hopefully a build switch :)
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Ok, but I'm kinda confused how I got a different package using the same install recipe which downloads the same source. Hmmm...also I just realized I may not have actually tested these changes on Linux. I thought I had, but looking again, I think I was using the original recipes on Linux (got confused cause my Linux env is remote). So, not quite sure how to proceed here...maybe I'll get some sleep first. ;)
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@gregvonkuster for me it is sufficient to remove all those export statements before ./configure ... perhaps that's a better fix? |
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@mvdbeek Yes, that's what I discovered as well (you/re referring to the R recipe, right?). I'm running the dev branch of galaxy, el capitan 10.11.2 as well, and I only have the the following installed via brew:pkg-config, gcc. Not sure what version of OS X all the export statements actually worked on, but they do not work on El Capitan. |
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Yes! I think the issue with the export statements is that on OS X this somehow fails if any of them is not defined. |
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Closing since this works for OS X https://toolshed.g2.bx.psu.edu/view/mvdbeek/package_r_3_1_2/174b90e5a7ec |
I have also tested these changes on Linux and all installs fine.